Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR02G03840
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR02G03840 | 1 |  |
| Tree-based ortholog | BR02G03840 BR03G01550 | 2 | ||
| Anchor point | BR03G01550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR02G03840 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00040G01770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00040G01770 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL6G04020 | 1 | |
| Anchor point | 1-to-1 | AL6G04020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G04020 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT5G04670 | 1 | |
| Anchor point | 1-to-1 | AT5G04670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G04670 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV0G01390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G01390 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_006G03450 | 1 | |
| Anchor point | 1-to-1 | CRU_006G03450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G03450 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00019G00070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G00070 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G11920 | 1 | |
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL08G08020 | 1 | |
| Anchor point | 1-to-1 | CL08G08020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G08020 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00323G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00323G00040 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00040G01240 | 1 | |
| Anchor point | 1-to-1 | CM00040G01240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00040G01240 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0007G21200 | 1 | |
| Anchor point | 1-to-1 | EG0007G21200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G21200 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV7G14840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G14840 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM02G18890 GM10G13860 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G18890 GM10G13860 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR02G14560 GR11G23030 | 2 | |
| Anchor point | 1-to-1 | GR02G14560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G23030 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-1 | MD02G024130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G024130 | 1 | ||
| Manihot esculenta | Tree-based ortholog | many-to-1 | ME12865G00470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12865G00470 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT1G092650 MT1G064620 MT1G050512 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G050512 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS02G01020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G01020 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00011G00190 PP00075G00030 | 2 | |
| Populus trichocarpa | Tree-based ortholog | many-to-many | PT08G02430 PT10G23590 | 2 | |
| Anchor point | 1-to-1 | PT10G23590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G23590 PT08G02430 | 2 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_012G00460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_012G00460 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC29766G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29766G00030 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL07G053190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G053190 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST07G020570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G020570 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP6G38140 | 1 | |
| Anchor point | 1-to-1 | TP6G38140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G38140 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0010G10040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G10040 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV13G12030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G12030 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM04G12390 ZM10G06540 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G06540 ZM04G12390 | 2 |