Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR01G17880
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR01G17880 BR02G17290 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | BR01G17880 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00048G01960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00048G01960 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G08970 AL7G14320 | 2 | |
| Anchor point | N/A | AL7G14320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G14320 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G64990 AT4G27630 | 2 | |
| Anchor point | N/A | AT4G27630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G27630 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV3G09850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G09850 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_002G09410 CRU_007G12440 | 2 | |
| Anchor point | N/A | CRU_007G12440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G12440 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00043G01240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00043G01240 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G11410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G11410 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL09G17920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G17920 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00284G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00284G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00050G00860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00050G00860 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G00520 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G00520 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV7G33580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G33580 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM11G11730 GM12G01740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G01740 GM11G11730 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR03G05760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G05760 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G050030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G050030 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD07G021540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD07G021540 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME11297G00580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11297G00580 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT5G005440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G005440 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G51180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G51180 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL14G00790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G00790 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT13G07770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G07770 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_002G31490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G31490 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30073G01160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30073G01160 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL07G045330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G045330 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST07G017450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G017450 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP5G19320 TP7G25580 | 2 | |
| Anchor point | N/A | TP7G25580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G19320 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G22260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G22260 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV16G05280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G05280 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM10G23390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G23390 | 1 |