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Integrative Orthology Viewer:
ATR_00105G00590
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00105G00590 | 1 |  |
| Tree-based ortholog | ATR_00105G00590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00105G00590 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G00220 | 1 | |
| Tree-based ortholog | 1-to-many | AL7G40780 AL5G00220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G00220 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G01275 | 1 | |
| Tree-based ortholog | 1-to-many | AT5G38070 AT2G01275 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G01275 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G18800 | 1 | |
| Tree-based ortholog | 1-to-many | BV2G07780 BV6G18800 | 2 | ||
| Anchor point | N/A | BV2G07780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G18800 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR08G02180 | 1 | |
| Tree-based ortholog | 1-to-many | BR02G00130 BR08G02180 BR06G35690 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G02180 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G00220 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_005G11620 CRU_005G00220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G00220 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00065G01100 | 1 | |
| Tree-based ortholog | 1-to-many | CP00116G00080 CP00065G01100 | 2 | ||
| Anchor point | N/A | CP00065G01100 CP00116G00080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00065G01100 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR09G08460 CR17G11500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G08460 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G06010 | 1 | |
| Tree-based ortholog | 1-to-many | CL01G06010 CL05G12070 | 2 | ||
| Anchor point | N/A | CL01G06010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G06010 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00034G00880 | 1 | |
| Tree-based ortholog | 1-to-many | CS00042G00430 CS00034G00880 | 2 | ||
| Anchor point | N/A | CS00042G00430 CS00034G00880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00034G00880 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00005G02630 | 1 | |
| Tree-based ortholog | 1-to-many | CM00005G02630 CM00042G01290 | 2 | ||
| Anchor point | N/A | CM00005G02630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G02630 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G16830 | 1 | |
| Tree-based ortholog | 1-to-many | EG0010G13470 EG0007G16830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G16830 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G06300 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G06300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G06300 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM10G41210 | 1 | |
| Tree-based ortholog | 1-to-many | GM02G10030 GM18G52931 GM20G26060 ... | 4 | ||
| Anchor point | N/A | GM20G26060 GM10G41210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM10G41210 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR02G18120 | 1 | |
| Tree-based ortholog | 1-to-many | GR01G08490 GR01G20320 GR05G16350 ... | 4 | ||
| Anchor point | N/A | GR01G08490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G08490 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ5G038040 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ5G038040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G038040 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G216180 MD13G001950 MD16G000520 | 3 | |
| Tree-based ortholog | 1-to-many | MD13G001950 MD00G216180 MD16G000520 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G216180 MD13G001950 MD16G000520 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03264G00150 ME03604G00220 ME08253G00020 | 3 | |
| Tree-based ortholog | 1-to-many | ME04043G00430 ME08253G00020 ME03264G00150 ... | 4 | ||
| Anchor point | N/A | ME04043G00430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08253G00020 ME03604G00220 ME03264G00150 | 3 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G108490 | 1 | |
| Tree-based ortholog | 1-to-many | MT7G082950 MT1G108490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G108490 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G03100 | 1 | |
| Tree-based ortholog | 1-to-1 | OS01G03100 | 1 | ||
| Anchor point | N/A | OS01G03100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G03100 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00189G00040 | 1 | |
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G12740 PT10G11560 PT17G12230 | 3 | |
| Tree-based ortholog | 1-to-many | PT04G09350 PT17G12230 PT08G12740 ... | 4 | ||
| Anchor point | N/A | PT08G12740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G09350 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G33130 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_003G12550 PPE_001G33130 | 2 | ||
| Anchor point | N/A | PPE_001G33130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G12550 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29048G00030 | 1 | |
| Tree-based ortholog | 1-to-many | RC28748G00010 RC29048G00030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28748G00010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL05G008390 | 1 | |
| Tree-based ortholog | 1-to-many | SL02G091230 SL04G007600 SL05G008390 | 3 | ||
| Anchor point | N/A | SL02G091230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G008390 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST05G009340 | 1 | |
| Tree-based ortholog | 1-to-many | ST04G006100 ST05G009340 | 2 | ||
| Anchor point | N/A | ST02G029780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G009340 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G12740 | 1 | |
| Tree-based ortholog | 1-to-many | TP7G04010 TP2G12740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G12740 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G27780 | 1 | |
| Tree-based ortholog | 1-to-many | TC0004G13000 TC0002G27780 | 2 | ||
| Anchor point | N/A | TC0002G27780 TC0004G13000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G13000 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV01G06870 | 1 | |
| Tree-based ortholog | 1-to-many | VV14G07330 VV01G06870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G07330 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM08G02630 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM08G02630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G02630 | 1 |