Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATR_00061G00140
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00061G00140 | 1 |  |
| Tree-based ortholog | ATR_00061G00140 ATR_00025G00130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00025G00130 ATR_00061G00140 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | many-to-many | AL1G17560 AL2G28060 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G17560 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-many | AT1G16690 AT1G79020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G16690 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV9G15090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G15090 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-many | BR02G25100 BR07G33660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR07G33660 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-many | CRU_001G15690 CRU_002G24480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G15690 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00010G00180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00010G00160 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR03G11920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G11920 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G17650 | 1 | |
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00324G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00324G00020 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00025G00080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00025G00080 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0006G34780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0006G34780 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV0G17400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G17400 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM19G06800 GM13G07691 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM13G07691 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-1 | GR11G00130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR11G00130 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD09G016140 MD05G020460 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD05G020460 MD09G016140 | 2 | ||
| Manihot esculenta | Tree-based ortholog | many-to-many | ME06582G00870 ME04300G00130 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06582G00870 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-1 | MT8G090035 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G090035 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS09G11270 OS08G25130 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G11270 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL15G00930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL15G00930 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00194G00860 PP00010G01630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00010G01630 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT14G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT14G00060 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_003G01540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_003G01540 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC30169G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30169G00030 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL02G032300 SL02G081650 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G032300 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-many | ST02G005830 ST02G024960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G005830 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-many | TP1G14830 TP5G34070 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G34070 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0006G04820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0006G04820 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV07G01410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G01410 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM02G28870 ZM07G10440 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM02G28870 ZM07G10440 | 2 |