Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATR_00041G01080
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00041G01080 | 1 |  |
| Tree-based ortholog | ATR_00041G01080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00041G01080 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL7G17920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G27640 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT4G24230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G24230 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV1G14340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G14340 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR03G49910 | 1 | |
| Tree-based ortholog | 1-to-many | BR03G47780 BR01G14220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G49910 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_007G15940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G15940 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00021G01120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00021G01120 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR14G04500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR14G04500 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL01G17670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G17670 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00006G01260 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00004G04330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G04330 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00007G06410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G06410 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G05770 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G01010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G01010 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV1G24850 | 1 | |
| Tree-based ortholog | 1-to-1 | FV1G24850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G24850 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM14G09680 GM17G35480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G35480 GM14G09680 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR10G02470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G02470 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G003890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ1G014280 LJ1G014160 | 2 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD07G020210 MD01G022250 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD07G020210 MD01G022250 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME03237G00410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03237G00410 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT1G418545 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G418545 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS03G14000 | 1 | |
| Anchor point | N/A | OS03G14000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G14000 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL13G01290 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00326G00050 PP00081G00950 PP00022G02120 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00326G00050 PP00022G02120 PP00039G01880 ... | 4 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT14G01870 PT02G12020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G01870 PT02G12020 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G23300 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G23300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G23300 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30170G01250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G01250 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL04G078090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G078090 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST04G031080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G031080 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP7G22210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G22210 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0008G08820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G06600 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV18G06180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G06180 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM01G09480 | 1 | |
| Anchor point | N/A | ZM01G09480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G09480 | 1 |