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Integrative Orthology Viewer:
AT5G60160
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G04710 AT5G60160 | 2 |  |
| Tree-based ortholog | AT5G60160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G60160 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00040G01100 ATR_00138G00420 ATR_00138G00430 | 3 | |
| Tree-based ortholog | 1-to-1 | ATR_00040G01100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00040G01100 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G04090 AL8G26400 | 2 | |
| Tree-based ortholog | 1-to-1 | AL8G26400 | 1 | ||
| Anchor point | N/A | AL8G26400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G26400 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G01490 BV4G03640 | 2 | |
| Tree-based ortholog | 1-to-1 | BV4G03640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G03640 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G24700 BR10G27010 | 2 | |
| Tree-based ortholog | 1-to-1 | BR03G24700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G24700 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_006G03490 CRU_008G20290 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_008G20290 | 1 | ||
| Anchor point | N/A | CRU_008G20290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G20290 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00013G01370 CP00183G00080 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00013G01370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00013G01370 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR10G03900 | 1 | |
| Tree-based ortholog | 1-to-1 | CR10G03900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G03900 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL05G22800 CL06G18280 | 2 | |
| Tree-based ortholog | 1-to-many | CL06G18270 CL06G18280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G18280 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00158G00130 CS00659G00020 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00158G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00158G00130 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00016G06980 CM00089G00760 | 2 | |
| Tree-based ortholog | 1-to-many | CM00089G00760 CM00089G00770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00089G00760 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G01050 EG0010G08770 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0002G01050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G01050 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G10530 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G10530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G10530 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G36940 GM06G18040 GM10G34800 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM04G36940 GM06G18040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G36940 GM06G18040 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR03G10970 GR04G28290 GR13G01260 | 3 | |
| Tree-based ortholog | 1-to-many | GR04G28290 GR03G10970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G28290 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G029920 | 1 | |
| Tree-based ortholog | 1-to-many | LJ5G029920 LJ3G044080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G029920 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G003140 MD00G268330 MD00G457270 ... | 7 | |
| Tree-based ortholog | 1-to-many | MD00G268330 MD14G015500 MD00G483350 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G268330 MD06G012610 MD14G015500 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04953G00150 ME12865G00370 | 2 | |
| Tree-based ortholog | 1-to-1 | ME04953G00150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04953G00150 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G092920 MT3G088860 | 2 | |
| Tree-based ortholog | 1-to-1 | MT3G088860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G088860 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G73680 OS12G13390 | 2 | |
| Tree-based ortholog | 1-to-1 | OS12G13390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G13390 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL12G02340 OL14G02580 | 2 | |
| Tree-based ortholog | 1-to-many | OL14G02580 OL12G02340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G02340 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00002G01960 PP00024G00510 PP00162G00010 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00162G00010 PP00414G00020 PP00019G00020 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00024G00510 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT08G02170 PT12G09520 PT15G09270 | 3 | |
| Tree-based ortholog | 1-to-many | PT12G09520 PT15G09270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G09270 PT12G09520 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_004G27420 PPE_005G16090 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_005G16090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G16090 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29930G00200 RC30147G04380 | 2 | |
| Tree-based ortholog | 1-to-1 | RC30147G04380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G04380 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G111180 SL11G007090 | 2 | |
| Tree-based ortholog | 1-to-1 | SL03G111180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G111180 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G023900 ST11G011690 | 2 | |
| Tree-based ortholog | 1-to-1 | ST03G023900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G023900 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G38110 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G12510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G38110 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0003G12920 TC0010G10440 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0003G12920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G12920 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV13G02220 VV17G07780 | 2 | |
| Tree-based ortholog | 1-to-1 | VV17G07780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G07780 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G20140 ZM03G36650 | 2 | |
| Tree-based ortholog | 1-to-1 | ZM03G36650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G36650 | 1 |