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Integrative Orthology Viewer:
AT5G53180
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G01150 AT5G53180 | 2 |  |
| Tree-based ortholog | AT5G53180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G53180 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00010G05050 ATR_00107G00410 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00107G00410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00107G00410 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G00970 AL8G17780 | 2 | |
| Tree-based ortholog | 1-to-1 | AL8G17780 | 1 | ||
| Anchor point | N/A | AL8G17780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G17780 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G39170 BV3G02530 | 2 | |
| Tree-based ortholog | 1-to-1 | BV3G02530 | 1 | ||
| Anchor point | N/A | BV3G02530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G02530 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G13750 BR05G35960 | 2 | |
| Tree-based ortholog | 1-to-many | BR10G07130 BR03G13750 | 2 | ||
| Anchor point | N/A | BR03G13750 BR10G07130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G13750 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G00950 CRU_008G13070 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_008G13070 | 1 | ||
| Anchor point | N/A | CRU_008G13070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G13070 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00003G00580 CP28755G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00003G00580 | 1 | ||
| Anchor point | N/A | CP00003G00580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G00580 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR00G02170 CR00G02200 | 2 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G00430 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G00430 | 1 | ||
| Anchor point | N/A | CL01G00430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G00430 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00104G00240 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00104G00240 | 1 | ||
| Anchor point | N/A | CS00104G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00104G00240 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00005G08570 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00005G08570 | 1 | ||
| Anchor point | N/A | CM00005G08570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G08570 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0010G11940 EG0011G03000 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0011G03000 | 1 | ||
| Anchor point | N/A | EG0011G03000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G11940 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G44160 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G36830 | 1 | ||
| Anchor point | N/A | FV7G36830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G36830 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G41660 GM09G37076 GM13G08170 ... | 5 | |
| Tree-based ortholog | 1-to-many | GM04G41660 GM06G13135 GM13G08170 ... | 4 | ||
| Anchor point | N/A | GM13G08170 GM04G41660 GM06G13135 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G08170 GM04G41660 GM14G30490 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G11570 GR06G01490 GR08G27030 ... | 4 | |
| Tree-based ortholog | 1-to-many | GR04G11570 GR08G27030 | 2 | ||
| Anchor point | N/A | GR08G27030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G27030 GR04G11570 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G037830 LJ2G017280 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ1G037830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G037830 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G117700 MD01G021470 MD07G019650 ... | 5 | |
| Tree-based ortholog | 1-to-many | MD01G021470 MD00G117700 MD07G019650 | 3 | ||
| Anchor point | N/A | MD01G021470 MD07G019650 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G117700 MD07G019650 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00341G00210 ME06089G00220 ME11581G01650 | 3 | |
| Tree-based ortholog | 1-to-many | ME06089G00220 ME00341G00210 | 2 | ||
| Anchor point | N/A | ME06089G00220 ME00341G00210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00341G00210 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G028440 MT3G090960 MT6G012590 ... | 4 | |
| Tree-based ortholog | 1-to-many | MT1G028440 MT3G090960 | 2 | ||
| Anchor point | N/A | MT1G028440 MT3G090960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G090960 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G43170 OS03G25980 OS08G33830 | 3 | |
| Tree-based ortholog | 1-to-1 | OS01G43170 | 1 | ||
| Anchor point | N/A | OS01G43170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G33830 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL12G01320 | 1 | |
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00081G00930 PP00326G00010 | 2 | |
| Tree-based ortholog | 1-to-many | PP00326G00010 PP00081G00930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00326G00010 PP00081G00930 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT04G12330 PT12G00060 PT12G02930 ... | 5 | |
| Tree-based ortholog | 1-to-many | PT12G02930 PT12G00060 PT15G02080 | 3 | ||
| Anchor point | N/A | PT15G02080 PT12G02930 PT12G00060 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G02080 PT12G02930 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_002G29500 PPE_003G24470 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_002G29500 | 1 | ||
| Anchor point | N/A | PPE_002G29500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G29500 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC28649G00120 RC30169G02980 | 2 | |
| Tree-based ortholog | 1-to-1 | RC30169G02980 | 1 | ||
| Anchor point | N/A | RC30169G02980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G02980 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G088110 SL03G007320 | 2 | |
| Tree-based ortholog | 1-to-1 | SL03G007320 | 1 | ||
| Anchor point | N/A | SL06G051910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G088110 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST02G034750 ST03G013590 ST06G016160 | 3 | |
| Tree-based ortholog | 1-to-many | ST03G013590 ST06G016160 | 2 | ||
| Anchor point | N/A | ST06G016160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G016160 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G00970 TP6G15360 | 2 | |
| Tree-based ortholog | 1-to-1 | TP6G15360 | 1 | ||
| Anchor point | N/A | TP6G15360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G15360 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0003G19430 TC0004G08850 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0003G19430 | 1 | ||
| Anchor point | N/A | TC0003G19430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G19430 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV14G02410 VV16G06720 | 2 | |
| Tree-based ortholog | 1-to-1 | VV16G06720 | 1 | ||
| Anchor point | N/A | VV16G06720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G06720 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G16760 ZM01G38280 ZM03G37400 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ZM03G37400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G14100 | 1 |