Integrative Orthology Viewer: AT5G49910 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT4G24280 AT4G37910 AT5G09590 ... | 4 | |
Tree-based ortholog | AT5G49910 AT4G37910 AT5G09590 ... | 4 | ||
Anchor point | AT4G24280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G49910 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00022G01090 ATR_00046G01680 ATR_00071G00900 | 3 | |
Tree-based ortholog | many-to-many | ATR_00046G01680 ATR_00071G00900 ATR_00022G01090 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00071G00900 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G09260 AL7G02690 AL7G17840 ... | 4 | |
Tree-based ortholog | many-to-many | AL8G13780 AL6G09260 AL7G02690 ... | 4 | ||
Anchor point | 1-to-many | AL7G17840 AL8G13780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G13780 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV6G01610 BV6G24110 BV9G17980 | 3 | |
Tree-based ortholog | many-to-many | BV1G03620 BV9G17980 BV6G24110 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G24110 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G01080 BR01G14300 BR02G02430 ... | 8 | |
Tree-based ortholog | many-to-many | BR01G01080 BR01G14300 BR03G03670 ... | 9 | ||
Anchor point | 1-to-1 | BR01G14300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR08G18010 BR03G47870 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G26740 CRU_007G02170 CRU_007G15870 ... | 5 | |
Tree-based ortholog | many-to-many | CRU_007G02170 CRU_003G26740 CRU_007G15870 ... | 4 | ||
Anchor point | 1-to-many | CRU_007G15870 CRU_008G09610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G09610 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00020G00420 CP00113G00330 CP00755G00020 | 3 | |
Tree-based ortholog | many-to-many | CP00113G00330 CP00755G00020 CP00020G00420 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00113G00330 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR06G00290 CR09G03290 | 2 | |
Tree-based ortholog | many-to-many | CR12G15980 CR06G00290 CR14G01270 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G00290 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL09G09520 CL10G07980 | 2 | |
Tree-based ortholog | many-to-many | CL06G10580 CL10G07980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G10580 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00014G00660 CS00430G00050 CS00815G00020 ... | 4 | |
Tree-based ortholog | many-to-many | CS00815G00020 CS00430G00060 CS00430G00050 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00430G00050 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00031G05310 CM00043G00020 CM00065G00290 | 3 | |
Tree-based ortholog | many-to-many | CM00043G00020 CM00031G05310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00043G00020 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G01390 EG0007G07480 EG0009G21760 ... | 4 | |
Tree-based ortholog | many-to-many | EG0007G01390 EG0009G21760 EG0007G07480 ... | 4 | ||
Anchor point | 1-to-1 | EG0009G23420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G23420 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G05850 FV5G38630 FV7G18430 | 3 | |
Tree-based ortholog | many-to-many | FV2G03910 FV6G13930 FV2G06660 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G38630 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G30290 GM08G06950 GM13G32790 ... | 7 | |
Tree-based ortholog | many-to-many | GM08G06950 GM16G00410 GM15G06530 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM16G00410 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G00910 GR06G23240 GR08G01820 ... | 6 | |
Tree-based ortholog | many-to-many | GR11G13400 GR08G01820 GR08G01830 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR05G00910 GR11G13400 GR06G23240 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G040160 LJ1G040640 LJ1G055440 ... | 4 | |
Tree-based ortholog | many-to-1 | LJ1G071040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G071040 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G059580 MD01G014410 MD08G005810 ... | 5 | |
Tree-based ortholog | many-to-many | MD01G010940 MD00G209180 MD03G017470 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G035810 MD00G209180 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02538G00330 ME02801G00040 ME05965G00070 ... | 4 | |
Tree-based ortholog | many-to-many | ME06914G01530 ME05965G00070 ME02538G00330 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06914G01530 ME02538G00330 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G005690 MT2G010020 MT2G032160 ... | 6 | |
Tree-based ortholog | many-to-many | MT2G005690 MT2G010020 MT2G017710 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G005690 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G49430 OS02G53420 OS03G02260 ... | 7 | |
Tree-based ortholog | many-to-many | OS09G31486 OS02G53420 OS05G23740 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G23740 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL02G04590 OL04G03910 OL04G03920 | 3 | |
Tree-based ortholog | many-to-many | OL02G04590 OL04G03920 OL04G03910 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G04590 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00006G00450 PP00059G01190 PP00059G01200 ... | 10 | |
Tree-based ortholog | many-to-many | PP00183G00220 PP00183G00250 PP00006G00450 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00006G00450 PP00153G00430 PP00153G00420 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G04270 PT01G28550 PT03G00630 ... | 5 | |
Tree-based ortholog | many-to-many | PT01G28550 PT03G00630 PT09G07970 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G22440 PT03G00630 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G22610 PPE_003G06310 PPE_004G23620 ... | 5 | |
Tree-based ortholog | many-to-many | PPE_008G09180 PPE_003G06310 PPE_004G23620 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G23620 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29765G00210 RC29804G00560 RC30073G00250 | 3 | |
Tree-based ortholog | many-to-many | RC27698G00020 RC29765G00210 RC29804G00560 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29765G00210 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G103450 SL01G106210 SL01G106260 ... | 4 | |
Tree-based ortholog | many-to-many | SL01G106260 SL01G103450 SL11G020040 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G103450 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G040390 ST01G043450 ST01G043480 | 3 | |
Tree-based ortholog | many-to-many | ST01G040390 ST01G043450 ST01G043480 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G040390 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP6G33780 TP7G35550 | 2 | |
Tree-based ortholog | many-to-many | TP7G22290 TP7G35550 TP6G33780 ... | 4 | ||
Anchor point | 1-to-1 | TP7G22280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G22290 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G08090 TC0002G10190 TC0004G16860 | 3 | |
Tree-based ortholog | many-to-many | TC0002G10190 TC0004G16860 TC0001G08090 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G16860 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV03G10900 VV13G05450 | 2 | |
Tree-based ortholog | many-to-many | VV17G06350 VV08G14760 VV03G10900 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G14230 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G49450 ZM02G32820 ZM05G06140 ... | 4 | |
Tree-based ortholog | many-to-many | ZM01G49450 ZM02G32820 ZM10G17760 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G49450 ZM05G06140 | 2 |