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Integrative Orthology Viewer:
AT5G27840
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G05580 AT5G27840 | 2 |  |
| Tree-based ortholog | AT5G27840 | 1 | ||
| Anchor point | AT3G05580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G27840 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00077G02060 ATR_00097G00260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00097G00260 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G05510 AL6G27400 | 2 | |
| Tree-based ortholog | 1-to-1 | AL6G27400 | 1 | ||
| Anchor point | 1-to-many | AL3G05510 AL6G27400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G27400 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G09610 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G09610 | 1 | ||
| Anchor point | 1-to-1 | BV4G09610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G09610 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G07490 BR02G36100 BR03G30010 ... | 5 | |
| Tree-based ortholog | 1-to-1 | BR06G27550 | 1 | ||
| Anchor point | 1-to-many | BR00G07490 BR03G30010 BR06G27550 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G27550 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G04690 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G04690 | 1 | ||
| Anchor point | 1-to-1 | CRU_003G04690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G04690 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00048G01000 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00048G01000 | 1 | ||
| Anchor point | 1-to-1 | CP00048G01000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00048G01000 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR06G11640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G11640 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G15680 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G15680 | 1 | ||
| Anchor point | 1-to-1 | CL02G15680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G15680 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00103G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00103G00020 | 1 | ||
| Anchor point | 1-to-1 | CS00103G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00103G00020 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00003G03410 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00003G03410 | 1 | ||
| Anchor point | 1-to-1 | CM00003G03410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G03410 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G15170 EG0008G36850 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0002G15170 | 1 | ||
| Anchor point | 1-to-many | EG0002G15170 EG0008G36850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G15170 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G02430 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G02430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G02430 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G39440 GM19G42050 | 2 | |
| Tree-based ortholog | 1-to-many | GM03G39440 GM19G42050 | 2 | ||
| Anchor point | 1-to-many | GM19G42050 GM03G39440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G42050 GM03G39440 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G23920 GR07G30100 GR07G34090 | 3 | |
| Tree-based ortholog | 1-to-many | GR07G30100 GR04G23920 GR07G34090 | 3 | ||
| Anchor point | 1-to-many | GR04G23920 GR07G30100 GR07G34090 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G30100 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ4G046330 LJ3G005700 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G041610 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD04G016220 MD12G021510 | 2 | |
| Tree-based ortholog | 1-to-many | MD12G021510 MD00G171930 MD04G016220 | 3 | ||
| Anchor point | 1-to-many | MD12G021510 MD04G016220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G021510 MD04G016220 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03614G05130 ME11668G00040 | 2 | |
| Tree-based ortholog | 1-to-many | ME11668G00040 ME03614G05130 | 2 | ||
| Anchor point | 1-to-1 | ME03614G05130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03614G05130 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G112870 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G112870 | 1 | ||
| Anchor point | 1-to-1 | MT7G112870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G112870 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G24750 | 1 | |
| Tree-based ortholog | 1-to-1 | OS01G24750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G24750 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL14G00360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G00360 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00097G01160 PP00022G01060 PP00283G00270 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00283G00270 PP00039G00450 PP00022G01060 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT05G02410 PT13G01470 | 2 | |
| Tree-based ortholog | 1-to-many | PT13G01470 PT05G02410 | 2 | ||
| Anchor point | 1-to-many | PT13G01470 PT05G02410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G01470 PT05G02410 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G32400 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G32400 | 1 | ||
| Anchor point | 1-to-1 | PPE_006G32400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G32400 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30128G02390 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30128G02390 | 1 | ||
| Anchor point | 1-to-1 | RC30128G02390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G02390 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G099860 | 1 | |
| Tree-based ortholog | 1-to-1 | SL01G099860 | 1 | ||
| Anchor point | 1-to-1 | SL01G099860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G099860 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G037640 | 1 | |
| Tree-based ortholog | 1-to-1 | ST01G037640 | 1 | ||
| Anchor point | 1-to-1 | ST01G037640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G037640 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G20960 TP3G04450 | 2 | |
| Tree-based ortholog | 1-to-1 | TP2G20960 | 1 | ||
| Anchor point | 1-to-many | TP3G04450 TP2G20960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G20960 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G31200 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G31200 | 1 | ||
| Anchor point | 1-to-1 | TC0005G31200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G31200 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV14G09120 | 1 | |
| Tree-based ortholog | 1-to-1 | VV14G09120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G09120 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM06G19490 ZM08G07750 ZM08G12500 | 3 | |
| Tree-based ortholog | 1-to-many | ZM06G19490 ZM08G12500 ZM08G07750 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G07750 | 1 |