Integrative Orthology Viewer: AT4G16760 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G35690 AT4G16760 | 2 | |
Tree-based ortholog | AT4G16760 | 1 | ||
Anchor point | AT2G35690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G16760 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00111G00300 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00111G00300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00111G00300 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL0G05000 AL4G21090 AL7G26250 | 3 | |
Tree-based ortholog | 1-to-1 | AL7G26250 | 1 | ||
Anchor point | 1-to-many | AL7G26250 AL4G21090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G26250 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G22000 | 1 | |
Tree-based ortholog | 1-to-1 | BV5G22000 | 1 | ||
Anchor point | 1-to-1 | BV5G22000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G22000 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G19140 BR03G17570 | 2 | |
Tree-based ortholog | 1-to-1 | BR01G19140 | 1 | ||
Anchor point | 1-to-1 | BR01G19140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G19140 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_004G16830 CRU_007G23570 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_007G23570 | 1 | ||
Anchor point | 1-to-many | CRU_007G23570 CRU_004G16830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G23570 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00089G00650 | 1 | |
Tree-based ortholog | 1-to-1 | CP00089G00650 | 1 | ||
Anchor point | 1-to-1 | CP00089G00650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00089G00650 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G06120 | 1 | |
Tree-based ortholog | 1-to-1 | CR16G06120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G06120 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G05600 | 1 | |
Tree-based ortholog | 1-to-1 | CL01G05600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G05600 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00053G00220 | 1 | |
Tree-based ortholog | 1-to-1 | CS00053G00220 | 1 | ||
Anchor point | 1-to-1 | CS00053G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00053G00220 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00005G04800 | 1 | |
Tree-based ortholog | 1-to-1 | CM00005G04800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G04800 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G03680 | 1 | |
Tree-based ortholog | 1-to-1 | EG0005G03680 | 1 | ||
Anchor point | 1-to-1 | EG0005G03680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G03680 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV5G14230 FV7G27930 | 2 | |
Tree-based ortholog | 1-to-many | FV5G14230 FV7G27930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G14230 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G41600 GM05G04940 GM11G03800 ... | 5 | |
Tree-based ortholog | 1-to-many | GM14G14990 GM11G03800 GM01G41600 ... | 5 | ||
Anchor point | 1-to-many | GM01G41600 GM05G04940 GM17G15320 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM05G04940 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G21390 GR07G02890 GR08G23360 | 3 | |
Tree-based ortholog | 1-to-many | GR07G02890 GR06G21390 GR08G23360 | 3 | ||
Anchor point | 1-to-many | GR06G21390 GR08G23360 GR07G02890 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G02890 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G034220 LJ4G021810 | 2 | |
Tree-based ortholog | 1-to-many | LJ2G034220 LJ4G021810 | 2 | ||
Anchor point | 1-to-1 | LJ2G034220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G021810 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD04G003390 MD13G010300 | 2 | |
Tree-based ortholog | 1-to-many | MD04G003390 MD13G010300 | 2 | ||
Anchor point | 1-to-1 | MD04G003390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD04G003390 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME11341G00260 ME11581G00780 | 2 | |
Tree-based ortholog | 1-to-many | ME11581G00780 ME11341G00260 | 2 | ||
Anchor point | 1-to-many | ME11341G00260 ME11581G00780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME11341G00260 ME11581G00780 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G100640 MT5G012920 | 2 | |
Tree-based ortholog | 1-to-many | MT5G012920 MT4G100640 | 2 | ||
Anchor point | 1-to-many | MT5G012920 MT4G100640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G100640 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G01390 | 1 | |
Tree-based ortholog | 1-to-1 | OS06G01390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G01390 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G02670 | 1 | |
Tree-based ortholog | 1-to-1 | OL01G02670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G02670 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00209G00670 | 1 | |
Tree-based ortholog | 1-to-1 | PP00209G00670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00209G00670 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G15550 PT03G07920 | 2 | |
Tree-based ortholog | 1-to-many | PT03G07920 PT01G15550 | 2 | ||
Anchor point | 1-to-many | PT03G07920 PT01G15550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G15550 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_005G07120 PPE_007G08070 | 2 | |
Tree-based ortholog | 1-to-many | PPE_005G07120 PPE_007G08070 | 2 | ||
Anchor point | 1-to-1 | PPE_005G07120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G07120 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29948G00330 | 1 | |
Tree-based ortholog | 1-to-1 | RC29948G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29948G00330 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL08G078390 SL08G078400 | 2 | |
Tree-based ortholog | 1-to-many | SL08G078400 SL08G078390 | 2 | ||
Anchor point | 1-to-1 | SL08G078390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G078390 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST08G024120 ST08G024130 | 2 | |
Tree-based ortholog | 1-to-many | ST08G024130 ST08G024120 | 2 | ||
Anchor point | 1-to-1 | ST08G024120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G024120 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G17950 TP7G17360 | 2 | |
Tree-based ortholog | 1-to-1 | TP7G17360 | 1 | ||
Anchor point | 1-to-many | TP7G17360 TP4G17950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G17360 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G24500 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G24500 | 1 | ||
Anchor point | 1-to-1 | TC0003G24500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G24500 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-many | VV00G02570 VV12G02370 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G02570 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM09G03930 ZM09G06960 | 2 | |
Tree-based ortholog | 1-to-many | ZM09G06960 ZM09G03930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G06960 ZM09G03930 | 2 |