Integrative Orthology Viewer: AT3G47550 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G47550 | 1 | |
Tree-based ortholog | AT3G47550 | 1 | ||
Anchor point | AT5G62460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G47550 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00010G04470 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00010G04470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G04470 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G16290 | 1 | |
Tree-based ortholog | 1-to-1 | AL5G16290 | 1 | ||
Anchor point | 1-to-many | AL5G16290 AL8G28860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G16290 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G00860 | 1 | |
Tree-based ortholog | 1-to-1 | BV5G00860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G00860 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR06G17790 | 1 | |
Tree-based ortholog | 1-to-many | BR06G20230 BR06G17790 | 2 | ||
Anchor point | 1-to-many | BR02G38790 BR06G20230 BR06G28970 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G17790 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G12790 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_005G12790 | 1 | ||
Anchor point | 1-to-many | CRU_005G12790 CRU_008G22510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G12790 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00111G00090 | 1 | |
Tree-based ortholog | 1-to-1 | CP00111G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00111G00090 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR09G08460 CR17G11500 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G08460 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL04G12030 | 1 | |
Tree-based ortholog | 1-to-1 | CL04G12030 | 1 | ||
Anchor point | 1-to-1 | CL05G25250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G12030 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00111G00440 | 1 | |
Tree-based ortholog | 1-to-1 | CS00111G00440 | 1 | ||
Anchor point | 1-to-many | CS00015G01700 CS00111G00440 CS00003G04320 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G04320 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00001G00740 | 1 | |
Tree-based ortholog | 1-to-1 | CM00001G00740 | 1 | ||
Anchor point | 1-to-1 | CM00016G04200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G00740 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0002G28590 | 1 | |
Anchor point | 1-to-1 | EG0002G04320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G28590 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G13260 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G13260 | 1 | ||
Anchor point | 1-to-many | FV0G05530 FV5G13260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G13260 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM20G04870 GM07G35750 GM02G11960 ... | 5 | |
Anchor point | 1-to-many | GM06G20860 GM01G05800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G11960 GM01G05800 GM20G04870 | 3 | ||
Gossypium raimondii | Orthologous gene family | 1-to-1 | GR08G19310 | 1 | |
Tree-based ortholog | 1-to-1 | GR07G03750 | 1 | ||
Anchor point | 1-to-many | GR08G19310 GR07G03750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G19310 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G038040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G038040 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G467020 MD06G015710 MD14G019210 | 3 | |
Tree-based ortholog | 1-to-many | MD14G019210 MD00G467020 MD06G015710 | 3 | ||
Anchor point | 1-to-many | MD09G003670 MD14G019210 MD17G004060 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G019210 MD06G015710 MD00G467020 | 3 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME12794G02190 | 1 | |
Tree-based ortholog | 1-to-many | ME08359G02330 ME12794G02190 | 2 | ||
Anchor point | 1-to-many | ME08359G02330 ME12794G02190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12794G02190 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G467220 MT5G040650 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G040650 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS08G33860 | 1 | |
Tree-based ortholog | 1-to-many | OS09G24650 OS08G33860 OS02G36740 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS09G24650 OS08G33860 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00189G00040 | 1 | |
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT08G08630 PT10G16920 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G16920 | 1 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_005G19850 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G19850 | 1 | ||
Anchor point | 1-to-many | PPE_001G28620 PPE_005G19850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G19850 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC30138G02450 | 1 | |
Tree-based ortholog | 1-to-1 | RC30138G02450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30138G02450 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G116030 | 1 | |
Tree-based ortholog | 1-to-many | SL06G069780 SL03G116030 | 2 | ||
Anchor point | 1-to-many | SL03G116030 SL06G069780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G116030 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G029490 | 1 | |
Tree-based ortholog | 1-to-many | ST06G026780 ST03G029490 | 2 | ||
Anchor point | 1-to-1 | ST06G026780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G029490 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G14330 | 1 | |
Tree-based ortholog | 1-to-1 | TP5G14330 | 1 | ||
Anchor point | 1-to-1 | TP5G14330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G14330 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G09030 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G09030 | 1 | ||
Anchor point | 1-to-1 | TC0003G09030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G09030 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV17G03680 | 1 | |
Tree-based ortholog | 1-to-1 | VV17G03680 | 1 | ||
Anchor point | 1-to-1 | VV17G03680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G03680 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM02G30690 ZM04G17270 ZM05G31730 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G31730 ZM04G17270 | 2 |