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Integrative Orthology Viewer:
AT3G47340
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G47340 AT5G10240 | 2 |  |
| Tree-based ortholog | AT3G47340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G47340 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00060G01050 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00007G00850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G00850 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G09940 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G16010 | 1 | ||
| Anchor point | N/A | AL5G16010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G16010 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV6G13100 BV7G04710 | 2 | |
| Tree-based ortholog | 1-to-1 | BV7G04710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G04710 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR06G18020 BR06G20300 | 2 | |
| Anchor point | N/A | BR06G18020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G18020 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_006G08500 CRU_008G25090 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_005G12580 | 1 | ||
| Anchor point | N/A | CRU_005G12580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G12580 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00002G04090 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00002G04090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00002G04090 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR10G01740 CR01G01020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G01020 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G19020 | 1 | |
| Tree-based ortholog | 1-to-many | CL08G09580 CL08G09590 CL02G19720 | 3 | ||
| Anchor point | N/A | CL02G19720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G09580 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00026G01320 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00026G01320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00026G01320 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00007G07870 CM00014G08630 | 2 | |
| Tree-based ortholog | 1-to-many | CM00109G00050 CM00014G08630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G08630 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G17740 EG0009G03540 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0002G17740 | 1 | ||
| Anchor point | N/A | EG0002G17740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G17740 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G22920 FV3G22900 | 2 | |
| Tree-based ortholog | 1-to-1 | FV3G22900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G22900 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G39320 GM11G27480 GM11G27720 ... | 7 | |
| Tree-based ortholog | 1-to-many | GM02G39320 GM14G37440 GM11G27720 ... | 5 | ||
| Anchor point | N/A | GM14G37440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM14G37440 GM02G39320 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G11700 GR06G10520 GR06G10540 ... | 6 | |
| Tree-based ortholog | 1-to-many | GR09G09050 GR06G10540 GR06G10520 ... | 5 | ||
| Anchor point | N/A | GR09G09050 GR01G11700 GR13G25950 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR06G10520 GR06G10540 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G021970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G021970 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G292000 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G237390 MD11G005710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G237390 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME08265G00810 ME11701G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | ME11701G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11701G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G087220 MT5G071360 | 2 | |
| Tree-based ortholog | 1-to-many | MT5G071360 MT3G464580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G071360 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G15420 | 1 | |
| Tree-based ortholog | 1-to-1 | OS03G18130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G15420 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL05G01720 OL03G01350 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G01350 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00410G00220 PP00044G01310 PP00350G00070 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00410G00220 PP00044G01310 PP00350G00070 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT05G07570 | 1 | |
| Tree-based ortholog | 1-to-many | PT01G27840 PT09G07290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G07290 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_006G01940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G01940 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC28281G00090 RC29594G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29594G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29594G00010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL06G007180 | 1 | |
| Tree-based ortholog | 1-to-1 | SL06G007180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G007180 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST06G006200 | 1 | |
| Tree-based ortholog | 1-to-1 | ST06G006200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G006200 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP5G14540 | 1 | |
| Anchor point | N/A | TP5G14540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G14540 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G09770 TC0009G29390 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0009G29390 | 1 | ||
| Anchor point | N/A | TC0009G29390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G29390 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV06G01570 | 1 | |
| Tree-based ortholog | 1-to-1 | VV06G01570 | 1 | ||
| Anchor point | N/A | VV06G01570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G01570 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM09G16420 | 1 | |
| Tree-based ortholog | 1-to-many | ZM08G02370 ZM03G40970 ZM01G12300 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G16420 | 1 |