Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G29030
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G29030 | 1 |  |
| Anchor point | AT1G26770 AT1G69530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G29030 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | many-to-1 | ATR_00010G05010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00119G00390 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G08530 | 1 | |
| Anchor point | many-to-many | AL5G09080 AL5G08530 AL1G26840 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G08530 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G02370 | 1 | |
| Anchor point | many-to-1 | BV6G02370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G02370 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G31920 BR09G04090 | 2 | |
| Anchor point | many-to-many | BR07G26310 BR09G04090 BR09G30110 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR06G31920 BR09G04090 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G07030 | 1 | |
| Anchor point | many-to-many | CRU_001G23290 CRU_005G07030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G07030 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00014G00940 | 1 | |
| Anchor point | many-to-many | CP00001G00460 CP00014G00940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00014G00940 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR04G04450 CR03G02810 CR08G06220 ... | 6 | |
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G18620 | 1 | |
| Anchor point | many-to-many | CL02G03700 CL09G18620 CL06G16680 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G18620 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00015G01880 | 1 | |
| Anchor point | many-to-1 | CS00015G01880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G01880 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00051G00410 | 1 | |
| Anchor point | many-to-many | CM00051G00410 CM00030G01030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00051G00410 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G16370 | 1 | |
| Anchor point | many-to-many | EG0009G12260 EG0007G19230 EG0002G26460 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G16370 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G44180 | 1 | |
| Anchor point | many-to-many | FV0G05340 FV5G13090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G44180 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM19G02810 | 1 | |
| Anchor point | many-to-many | GM20G04490 GM06G20970 GM18G49570 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM19G02810 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR06G01510 GR11G12300 | 2 | |
| Anchor point | many-to-many | GR06G01510 GR01G23970 GR08G19420 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G01510 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G037820 | 1 | |
| Anchor point | many-to-many | LJ1G037820 LJ2G017270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G037820 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G302310 MD09G003810 MD17G004270 | 3 | |
| Anchor point | many-to-many | MD06G015810 MD14G019300 MD17G004270 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G321210 MD13G004560 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME11341G00860 ME11581G01640 | 2 | |
| Anchor point | many-to-many | ME11581G01640 ME12794G02260 ME08359G02210 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME11581G01640 ME11341G00860 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G011060 | 1 | |
| Anchor point | many-to-many | MT7G011060 MT6G012500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G011060 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G60770 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00052G00500 | 1 | |
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT04G12320 PT17G08530 | 2 | |
| Anchor point | many-to-1 | PT17G08530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G12320 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_003G24480 | 1 | |
| Anchor point | many-to-many | PPE_005G20000 PPE_003G24480 PPE_001G28820 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G24480 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC28649G00130 | 1 | |
| Anchor point | many-to-many | RC29813G00610 RC30138G02270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28649G00130 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G088100 | 1 | |
| Anchor point | many-to-many | SL03G115890 SL02G088100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G010890 | 1 | ||
| Solanum tuberosum | Anchor point | many-to-many | ST02G034760 ST03G029370 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G014660 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G17660 | 1 | |
| Anchor point | many-to-many | TP1G22030 TP5G24650 TP2G17660 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G17660 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0007G18000 | 1 | |
| Anchor point | many-to-many | TC0007G18000 TC0002G04760 TC0002G34240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G18000 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV14G02400 | 1 | |
| Anchor point | many-to-many | VV14G02400 VV17G03550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G02400 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G40190 | 1 | |