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Integrative Orthology Viewer:
AT3G08550
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G41451 AT3G08550 AT3G57200 | 3 |  |
| Tree-based ortholog | AT3G08550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G08550 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00111G00290 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00111G00290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00111G00290 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G08610 AL4G28740 AL5G27590 | 3 | |
| Tree-based ortholog | 1-to-1 | AL3G08610 | 1 | ||
| Anchor point | N/A | AL3G08610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G08610 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G73930 BV3G12130 | 2 | |
| Tree-based ortholog | 1-to-1 | BV0G73930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G73930 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G39340 BR04G24810 | 2 | |
| Tree-based ortholog | 1-to-many | BR05G33370 BR01G39340 | 2 | ||
| Anchor point | N/A | BR05G33370 BR01G39340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G39340 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G07340 CRU_005G22680 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_003G07340 | 1 | ||
| Anchor point | N/A | CRU_003G07340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G07340 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00120G00110 CP00197G00150 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00197G00150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00197G00150 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR04G02520 | 1 | |
| Tree-based ortholog | 1-to-1 | CR04G02520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR04G02520 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G13670 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G14230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G13670 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00234G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00234G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00234G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00011G07660 CM00016G00260 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00016G00260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G00260 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G19210 EG0007G26230 | 2 | |
| Tree-based ortholog | 1-to-many | EG0007G26230 EG2224G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G26230 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G20520 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G20520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G20520 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G26230 GM11G20930 | 2 | |
| Tree-based ortholog | 1-to-many | GM04G26230 GM11G20930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G20930 GM04G26230 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G22750 GR07G35550 GR12G08080 ... | 4 | |
| Tree-based ortholog | 1-to-many | GR12G08080 GR13G01490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G01490 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G058650 LJ3G011550 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ3G011550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G011550 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD14G008760 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G486840 MD00G201480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD05G021700 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME05875G02740 ME08420G00100 ME09692G00080 ... | 4 | |
| Tree-based ortholog | 1-to-many | ME08420G00100 ME05875G02740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08420G00100 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G023150 MT7G090740 | 2 | |
| Tree-based ortholog | 1-to-1 | MT3G023150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G023150 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G13200 | 1 | |
| Tree-based ortholog | 1-to-1 | OS01G13200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G13200 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G00060 | 1 | |
| Tree-based ortholog | 1-to-1 | OL01G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G00060 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00142G00680 PP00143G00750 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00142G00680 PP00143G00750 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G02270 PT03G20290 PT06G04550 ... | 4 | |
| Tree-based ortholog | 1-to-many | PT03G20290 PT01G02270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G02270 PT03G20290 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_002G01110 PPE_003G13150 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_002G01110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G01110 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30131G03960 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30131G03960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G03960 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G068200 SL10G079210 | 2 | |
| Tree-based ortholog | 1-to-1 | SL01G068200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G068200 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G024920 ST10G020900 | 2 | |
| Tree-based ortholog | 1-to-many | ST01G024920 ST02G012070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G024920 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G07020 TP4G23720 TP5G05370 | 3 | |
| Tree-based ortholog | 1-to-1 | TP3G07020 | 1 | ||
| Anchor point | N/A | TP3G07020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G07020 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0005G14660 TC0010G00500 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0010G00500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G00500 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV00G25340 | 1 | |
| Tree-based ortholog | 1-to-1 | VV00G25340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G25340 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G23150 ZM03G00480 | 2 | |
| Tree-based ortholog | 1-to-many | ZM03G00480 ZM01G23150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G23150 | 1 |