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Integrative Orthology Viewer:
AT2G42580
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G53300 AT2G42580 AT3G14950 ... | 4 |  |
| Tree-based ortholog | AT2G42580 | 1 | ||
| Anchor point | AT1G53300 AT3G58620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G42580 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00021G00340 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00021G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00021G00340 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G48390 AL3G15720 AL4G29960 ... | 4 | |
| Tree-based ortholog | 1-to-1 | AL4G29960 | 1 | ||
| Anchor point | many-to-many | AL5G29200 AL4G29960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G29960 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G05430 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G05430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G05430 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G33740 BR03G21150 BR05G03000 ... | 7 | |
| Tree-based ortholog | 1-to-many | BR03G21150 BR05G03000 | 2 | ||
| Anchor point | many-to-many | BR05G03000 BR09G38730 BR03G21150 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G21150 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G40540 CRU_003G13890 CRU_004G24130 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CRU_004G24130 | 1 | ||
| Anchor point | many-to-many | CRU_004G24130 CRU_005G24030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G24130 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00097G00930 CP00209G00360 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00209G00360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00209G00360 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G07700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G10460 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL09G10900 CL11G11540 | 2 | |
| Tree-based ortholog | 1-to-1 | CL09G10900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G10900 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00041G00160 CS00260G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00041G00160 | 1 | ||
| Anchor point | many-to-1 | CS00041G00160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00260G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00034G03190 CM00081G00500 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00011G07420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G03190 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G09960 EG0011G09380 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0011G09380 | 1 | ||
| Anchor point | many-to-1 | EG0011G09380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G09960 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV3G18390 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G18390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G18390 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM06G33850 GM12G33770 GM12G35780 ... | 6 | |
| Tree-based ortholog | 1-to-many | GM12G33770 GM13G36720 | 2 | ||
| Anchor point | many-to-1 | GM12G33770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G34610 GM12G35780 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G06180 GR04G27230 GR06G00170 | 3 | |
| Tree-based ortholog | 1-to-1 | GR06G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G00170 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ3G004600 LJ3G016470 | 2 | |
| Tree-based ortholog | 1-to-many | LJ3G004600 LJ3G016470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G016470 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G011520 MD09G000100 MD10G005040 ... | 4 | |
| Tree-based ortholog | 1-to-1 | MD09G000100 | 1 | ||
| Anchor point | many-to-1 | MD11G023600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G000100 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02610G00060 ME03741G00450 ME07520G01490 ... | 4 | |
| Tree-based ortholog | 1-to-many | ME07520G01490 ME11960G00230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME11960G00230 ME07520G01490 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT2G078020 | 1 | |
| Tree-based ortholog | 1-to-1 | MT2G078020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G078020 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G42960 OS05G11990 OS05G50990 | 3 | |
| Tree-based ortholog | 1-to-many | OS01G42960 OS05G50990 OS05G11990 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G42960 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL14G02660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G02410 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00025G01430 PP00037G01010 PP00169G00030 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00169G00030 PP00317G00400 PP00037G01010 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00317G00400 PP00169G00030 PP00037G01010 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G39260 PT11G11150 | 2 | |
| Tree-based ortholog | 1-to-many | PT11G11150 PT01G39260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G39260 PT11G11150 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_004G16000 PPE_004G23160 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_004G23160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G23160 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30150G00210 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30150G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30150G00210 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL10G007230 SL10G007240 | 2 | |
| Tree-based ortholog | 1-to-many | SL10G007430 SL10G007420 SL10G007230 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G062580 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST07G024660 ST10G007950 ST10G007960 ... | 5 | |
| Tree-based ortholog | 1-to-many | ST10G008010 ST10G007990 ST10G007960 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G024660 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G39880 TP3G13160 TP4G24720 ... | 4 | |
| Tree-based ortholog | 1-to-1 | TP4G24720 | 1 | ||
| Anchor point | many-to-many | TP1G39880 TP4G24720 TP5G04250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G24720 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G14540 TC0007G10110 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0001G14540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G14540 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV12G02800 VV19G01930 | 2 | |
| Tree-based ortholog | 1-to-1 | VV12G02800 | 1 | ||
| Anchor point | many-to-1 | VV12G02800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G02800 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G01100 ZM03G39900 ZM04G11840 ... | 6 | |
| Tree-based ortholog | 1-to-many | ZM03G39900 ZM08G23770 ZM08G11630 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G11840 ZM03G01100 ZM08G05820 | 3 |