Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G40760
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G40760 | 1 |  |
| Tree-based ortholog | AT2G40760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G40760 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00077G00830 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00077G00830 | 1 | ||
| Anchor point | N/A | ATR_00077G00830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00077G00830 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL4G27670 | 1 | |
| Tree-based ortholog | 1-to-many | AL4G27670 AL4G23660 AL4G23650 | 3 | ||
| Anchor point | N/A | AL4G27670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G27670 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV2G00860 | 1 | |
| Tree-based ortholog | 1-to-1 | BV2G00860 | 1 | ||
| Anchor point | N/A | BV2G00860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G00860 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR04G24410 | 1 | |
| Tree-based ortholog | 1-to-1 | BR04G24410 | 1 | ||
| Anchor point | N/A | BR04G24410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G24410 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G22290 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_004G22290 | 1 | ||
| Anchor point | N/A | CRU_004G22290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G22290 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00019G00460 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00019G00460 | 1 | ||
| Anchor point | N/A | CP00019G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G00460 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G14320 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL07G05160 | 1 | |
| Tree-based ortholog | 1-to-1 | CL07G05160 | 1 | ||
| Anchor point | N/A | CL07G05160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G05160 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS03148G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CS03148G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS03148G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00041G01440 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00041G01440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00041G01440 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G25180 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0007G25180 | 1 | ||
| Anchor point | N/A | EG0007G25180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G25180 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G31310 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G31310 | 1 | ||
| Anchor point | N/A | FV7G31310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G31310 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM02G38340 | 1 | |
| Tree-based ortholog | 1-to-1 | GM02G38340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM02G38340 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G20670 | 1 | |
| Tree-based ortholog | 1-to-1 | GR11G20670 | 1 | ||
| Anchor point | N/A | GR11G20670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G20670 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ2G038330 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ2G038330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G038330 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G401920 MD04G002970 MD12G019760 | 3 | |
| Tree-based ortholog | 1-to-many | MD00G401920 MD04G002970 MD12G019760 | 3 | ||
| Anchor point | N/A | MD04G002970 MD12G019760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G019760 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME10729G00090 | 1 | |
| Tree-based ortholog | 1-to-1 | ME10729G00090 | 1 | ||
| Anchor point | N/A | ME10729G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10729G00090 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G067730 | 1 | |
| Tree-based ortholog | 1-to-1 | MT5G067730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G067730 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS05G25780 | 1 | |
| Tree-based ortholog | 1-to-1 | OS05G25780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G25780 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G02360 | 1 | |
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00015G01740 PP00297G00110 | 2 | |
| Tree-based ortholog | 1-to-many | PP00297G00110 PP00015G01740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00297G00110 PP00015G01740 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT19G05940 | 1 | |
| Tree-based ortholog | 1-to-1 | PT19G05940 | 1 | ||
| Anchor point | N/A | PT19G05940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT19G05940 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G25430 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G25430 | 1 | ||
| Anchor point | N/A | PPE_002G25430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G25430 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29729G01220 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29729G01220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29729G01220 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G095760 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G095760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G095760 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G021100 | 1 | |
| Tree-based ortholog | 1-to-1 | ST03G021100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G021100 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP4G23070 | 1 | |
| Tree-based ortholog | 1-to-1 | TP4G23070 | 1 | ||
| Anchor point | N/A | TP4G23070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G23070 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0010G18200 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0010G18200 | 1 | ||
| Anchor point | N/A | TC0010G18200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G18200 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV13G09110 | 1 | |
| Tree-based ortholog | 1-to-1 | VV13G09110 | 1 | ||
| Anchor point | N/A | VV13G09110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G09110 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM06G21590 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM06G21590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G21590 | 1 |