Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G19760
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G19760 | 1 |  |
| Tree-based ortholog | AT2G19760 | 1 | ||
| Anchor point | AT4G29340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G19760 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00056G01320 ATR_00056G01310 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00056G01320 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G36420 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G36420 | 1 | ||
| Anchor point | 1-to-many | AL3G36410 AL7G12380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G36420 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV2G15910 BV2G15920 BV8G05720 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G05700 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR01G07970 | 1 | |
| Anchor point | 1-to-many | BR10G09830 BR09G10340 BR09G45460 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G07970 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G32720 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_007G10580 CRU_003G32720 | 2 | ||
| Anchor point | 1-to-many | CRU_007G10580 CRU_003G32720 CRU_008G16660 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G32720 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00078G00310 | 1 | |
| Anchor point | 1-to-1 | CP00078G00310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00078G00310 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR10G02160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G02160 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL11G09160 | 1 | |
| Anchor point | 1-to-1 | CL11G16950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G16950 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00106G00050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00106G00050 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00003G07290 | 1 | |
| Anchor point | 1-to-1 | CM00003G07290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G07290 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0003G04910 | 1 | |
| Anchor point | 1-to-1 | EG0003G07940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G04910 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G34650 | 1 | |
| Anchor point | 1-to-1 | FV0G35990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G35990 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM08G03660 GM05G35970 GM08G03650 | 3 | |
| Anchor point | 1-to-many | GM08G03640 GM01G00920 GM05G35970 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G03650 GM05G35970 GM08G03660 | 3 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR01G02530 | 1 | |
| Anchor point | 1-to-1 | GR10G07840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR10G07840 GR09G02840 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ4G048360 LJ2G012990 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ4G048360 LJ2G012990 | 2 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G006950 MD00G343120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G261550 MD15G014150 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME03693G00040 | 1 | |
| Anchor point | 1-to-many | ME00847G00300 ME09501G00280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00847G00310 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT6G090030 MT8G102330 | 2 | |
| Anchor point | 1-to-1 | MT8G102330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G102330 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS06G05880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS10G17680 OS10G17660 | 2 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL08G02070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL08G02070 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00027G00770 PP00027G00800 PP00328G00140 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00027G00770 PP00003G00580 PP00328G00140 ... | 4 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT18G05760 PT06G23520 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G04770 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G44840 | 1 | |
| Anchor point | 1-to-1 | PPE_007G23710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G44840 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29912G01400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29912G01400 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL11G070130 SL08G066110 | 2 | |
| Anchor point | 1-to-many | SL12G008590 SL12G044630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G070130 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST12G009750 ST11G027320 ST08G014950 | 3 | |
| Anchor point | 1-to-many | ST12G009750 ST12G022440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G014950 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP7G27230 | 1 | |
| Anchor point | 1-to-many | TP7G27220 TP6G18380 TP3G33090 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G33090 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0009G04570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G09390 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV04G07670 | 1 | |
| Anchor point | 1-to-many | VV04G07670 VV11G04280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV09G04110 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM09G04550 ZM06G08770 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G04550 ZM06G08770 | 2 |