Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G62780
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G62780 | 1 |  |
| Tree-based ortholog | AT1G62780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G62780 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00002G02580 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00002G02580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G02580 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G02690 | 1 | |
| Tree-based ortholog | 1-to-1 | AL2G02690 | 1 | ||
| Anchor point | N/A | AL2G02690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G02690 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G16730 | 1 | |
| Tree-based ortholog | 1-to-1 | BV5G16730 | 1 | ||
| Anchor point | N/A | BV5G16730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G16730 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G13330 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G13330 | 1 | ||
| Anchor point | N/A | BR09G13330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G13330 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G02090 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_002G02090 | 1 | ||
| Anchor point | N/A | CRU_002G02090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G02090 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00029G01080 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00029G01080 | 1 | ||
| Anchor point | N/A | CP00029G01080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00029G01080 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR13G04070 | 1 | |
| Tree-based ortholog | 1-to-1 | CR13G04070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G04070 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G03520 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G03520 | 1 | ||
| Anchor point | N/A | CL01G03520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G03520 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00271G00210 | 1 | |
| Tree-based ortholog | 1-to-many | CS11209G00010 CS00271G00210 | 2 | ||
| Anchor point | N/A | CS00271G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00271G00210 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00005G05350 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00005G05350 | 1 | ||
| Anchor point | N/A | CM00005G05350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G05350 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0004G16440 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0004G16440 | 1 | ||
| Anchor point | N/A | EG0004G16440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G16440 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G00530 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G00530 | 1 | ||
| Anchor point | N/A | FV5G00530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G00530 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM11G03320 | 1 | |
| Tree-based ortholog | 1-to-many | GM05G14731 GM01G42040 GM11G03320 | 3 | ||
| Anchor point | N/A | GM11G03320 GM01G42040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM11G03320 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR07G02100 | 1 | |
| Tree-based ortholog | 1-to-1 | GR07G02100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G02100 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ2G034960 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ2G034960 | 1 | ||
| Anchor point | N/A | LJ2G034960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G034960 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G153850 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G153850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G153850 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME06775G00090 | 1 | |
| Tree-based ortholog | 1-to-1 | ME06775G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06775G00090 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G011990 | 1 | |
| Tree-based ortholog | 1-to-1 | MT5G011990 | 1 | ||
| Anchor point | N/A | MT5G011990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G011990 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS04G01540 | 1 | |
| Tree-based ortholog | 1-to-1 | OS04G01540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G01540 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL01G01330 | 1 | |
| Tree-based ortholog | 1-to-1 | OL01G01330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G01330 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00120G00050 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00120G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00120G00050 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT01G11910 | 1 | |
| Tree-based ortholog | 1-to-1 | PT01G11910 | 1 | ||
| Anchor point | N/A | PT01G11910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G11910 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_005G08400 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G08400 | 1 | ||
| Anchor point | N/A | PPE_005G08400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G08400 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30190G01680 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30190G01680 | 1 | ||
| Anchor point | N/A | RC30190G01680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G01680 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL08G079240 | 1 | |
| Tree-based ortholog | 1-to-1 | SL08G079240 | 1 | ||
| Anchor point | N/A | SL08G079240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G079240 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST08G025080 | 1 | |
| Tree-based ortholog | 1-to-1 | ST08G025080 | 1 | ||
| Anchor point | N/A | ST08G025080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G025080 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G01860 | 1 | |
| Tree-based ortholog | 1-to-1 | TP2G01860 | 1 | ||
| Anchor point | N/A | TP2G01860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G01860 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G25590 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G25590 | 1 | ||
| Anchor point | N/A | TC0003G25590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G25590 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV00G14990 | 1 | |
| Tree-based ortholog | 1-to-1 | VV00G14990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G14990 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM07G02130 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM07G02130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G02130 | 1 |