Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G55870
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G55870 | 1 |  |
| Tree-based ortholog | AT1G55870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G55870 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00061G02490 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00061G02490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00061G02490 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G50540 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G50540 | 1 | ||
| Anchor point | N/A | AL1G50540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G50540 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G02710 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G02710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G02710 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR06G00140 | 1 | |
| Tree-based ortholog | 1-to-1 | BR06G00140 | 1 | ||
| Anchor point | N/A | BR06G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G00140 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G42290 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G42290 | 1 | ||
| Anchor point | N/A | CRU_001G42290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G42290 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00012G01200 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00012G01200 | 1 | ||
| Anchor point | N/A | CP00012G01200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G01200 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR02G05270 | 1 | |
| Tree-based ortholog | 1-to-many | CR02G05270 CR02G03880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G05270 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G03780 | 1 | |
| Tree-based ortholog | 1-to-1 | CL10G03780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G03780 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00070G00340 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00070G00340 | 1 | ||
| Anchor point | N/A | CS00070G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00070G00340 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00021G04410 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00021G04410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G04410 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G16600 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G16600 | 1 | ||
| Anchor point | N/A | EG0006G16600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G16600 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G42230 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G42230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G42230 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM08G44260 GM18G08430 | 2 | |
| Tree-based ortholog | 1-to-many | GM18G08430 GM08G44260 | 2 | ||
| Anchor point | N/A | GM08G44260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G08430 GM08G44260 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR02G10070 | 1 | |
| Tree-based ortholog | 1-to-1 | GR02G10070 | 1 | ||
| Anchor point | N/A | GR02G10070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G10070 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G047830 | 1 | |
| Malus domestica | Orthologous gene family | 1-to-many | MD10G028130 MD11G002750 MD11G002760 | 3 | |
| Tree-based ortholog | 1-to-many | MD11G002760 MD11G002750 MD00G427400 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G427400 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME02421G01070 | 1 | |
| Tree-based ortholog | 1-to-1 | ME02421G01070 | 1 | ||
| Anchor point | N/A | ME02421G01070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02421G01070 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G460830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G460830 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS04G39260 | 1 | |
| Tree-based ortholog | 1-to-1 | OS04G39260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G39260 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00055G00190 PP00077G00460 | 2 | |
| Tree-based ortholog | 1-to-1 | PP00077G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00077G00460 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT01G36840 | 1 | |
| Tree-based ortholog | 1-to-1 | PT01G36840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G36840 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G04900 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G04900 | 1 | ||
| Anchor point | N/A | PPE_006G04900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G04900 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29629G00510 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29629G00510 | 1 | ||
| Anchor point | N/A | RC29629G00510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29629G00510 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL07G065620 | 1 | |
| Tree-based ortholog | 1-to-1 | SL07G065620 | 1 | ||
| Anchor point | N/A | SL07G065620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G065620 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST07G028210 ST07G028230 | 2 | |
| Tree-based ortholog | 1-to-1 | ST07G028210 | 1 | ||
| Anchor point | N/A | ST07G028210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G028210 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G41470 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G41470 | 1 | ||
| Anchor point | N/A | TP1G41470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G41470 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0007G01190 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0007G01190 | 1 | ||
| Anchor point | N/A | TC0007G01190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G01190 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV19G05710 | 1 | |
| Tree-based ortholog | 1-to-1 | VV19G05710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G05710 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM10G18470 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM10G18470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G18470 | 1 |