Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G51640
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G51640 | 1 |  |
| Tree-based ortholog | AT1G51640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G51640 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00019G03960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00019G03960 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G46390 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G46390 | 1 | ||
| Anchor point | N/A | AL1G46390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G46390 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV3G05340 | 1 | |
| Anchor point | N/A | BV0G26650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G05340 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR05G17750 BR06G02280 | 2 | |
| Anchor point | N/A | BR06G02280 BR05G17750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G17750 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G38590 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G38590 | 1 | ||
| Anchor point | N/A | CRU_001G38590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G38590 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP02829G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00023G00250 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR10G00900 | 1 | |
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL09G01220 | 1 | |
| Anchor point | N/A | CL09G01220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G12390 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS05186G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS05186G00010 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00067G00750 | 1 | |
| Anchor point | N/A | CM00067G00750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G05460 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0006G34300 | 1 | |
| Anchor point | N/A | EG0006G34300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G34300 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G18510 | 1 | |
| Anchor point | N/A | FV0G18510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G36430 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM07G00603 GM08G23790 | 2 | |
| Anchor point | N/A | GM08G23790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G23790 GM07G00603 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR09G11850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G24550 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G004400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G004400 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD09G012470 MD17G012880 | 2 | |
| Anchor point | N/A | MD17G012880 MD09G012470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G038330 MD08G013470 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME00918G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00918G00010 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT2G041650 MT4G008260 | 2 | |
| Anchor point | N/A | MT4G008260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G008260 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS06G48330 OS02G05620 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G48330 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00038G01650 PP00097G00450 PP00006G02120 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00097G00450 PP00006G02120 PP00038G01650 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G27290 PT18G00840 | 2 | |
| Tree-based ortholog | 1-to-many | PT10G25050 PT08G00870 | 2 | ||
| Anchor point | N/A | PT10G25050 PT08G00870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G25050 PT08G00870 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_003G00570 | 1 | |
| Anchor point | N/A | PPE_003G00570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G00570 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29578G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29578G00060 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL08G069100 SL12G096370 SL12G055770 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G096370 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST08G017180 ST12G028710 ST12G023720 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G028710 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G38280 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G38280 | 1 | ||
| Anchor point | N/A | TP1G38280 TP3G12350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G38280 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0006G06470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G06470 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV04G09290 VV09G01420 VV09G01400 | 3 | |
| Anchor point | N/A | VV09G01400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G09290 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G14540 ZM05G19600 ZM04G39990 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G39990 ZM05G19600 | 2 |