Integrative Orthology Viewer: AT1G49240 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G49240 AT2G42090 AT2G42100 ... | 6 | |
Tree-based ortholog | AT3G18780 AT1G49240 | 2 | ||
Anchor point | AT3G18780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G49240 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00131G00770 | 1 | |
Tree-based ortholog | many-to-many | ATR_00131G00770 ATR_00061G00340 ATR_00033G01950 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00018G01010 ATR_00030G00160 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G43140 AL3G20380 AL4G23430 ... | 6 | |
Tree-based ortholog | many-to-many | AL1G43140 AL3G20380 | 2 | ||
Anchor point | 1-to-many | AL3G20380 AL1G43140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL3G20380 AL1G43140 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV1G07370 | 1 | |
Tree-based ortholog | many-to-many | BV1G07370 BV1G07360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G06640 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G22520 BR01G30860 BR02G12320 ... | 11 | |
Tree-based ortholog | many-to-1 | BR01G30860 | 1 | ||
Anchor point | 1-to-many | BR01G30860 BR05G24850 BR03G35670 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G30550 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G36530 CRU_003G17770 CRU_004G23580 ... | 5 | |
Tree-based ortholog | many-to-many | CRU_003G17770 CRU_001G36530 | 2 | ||
Anchor point | 1-to-many | CRU_001G36530 CRU_003G17770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G36530 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00001G03880 CP00002G00410 CP00085G00640 | 3 | |
Tree-based ortholog | many-to-many | CP00012G00750 CP00046G00240 CP00013G00250 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00081G01630 CP00081G01710 | 2 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR03G07850 CR13G07280 | 2 | |
Tree-based ortholog | many-to-many | CR13G07280 CR03G07850 CR08G06470 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G07280 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL04G08080 CL09G13260 CL09G20150 | 3 | |
Tree-based ortholog | many-to-1 | CL09G13260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL02G01440 CL01G08330 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00013G02190 CS00143G00290 | 2 | |
Tree-based ortholog | many-to-many | CS00013G02190 CS00013G02670 CS00005G02350 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00024G00460 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-1 | CM00034G03060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00059G00790 CM00007G10720 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G21060 EG0005G09520 EG0008G27910 ... | 4 | |
Tree-based ortholog | many-to-many | EG0009G01890 EG0009G01900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G01890 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G31040 FV0G41300 FV7G26430 | 3 | |
Tree-based ortholog | many-to-1 | FV7G03790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G03790 | 1 | ||
Glycine max | Orthologous gene family | many-to-1 | GM06G15520 | 1 | |
Tree-based ortholog | many-to-many | GM05G32220 GM08G15480 GM04G39380 | 3 | ||
Anchor point | 1-to-1 | GM04G39380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM04G39380 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR00G00250 GR02G00150 GR02G15640 ... | 7 | |
Tree-based ortholog | many-to-many | GR07G06360 GR00G00250 GR12G03050 ... | 4 | ||
Anchor point | 1-to-many | GR06G17310 GR12G03050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G06360 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G036960 | 1 | |
Tree-based ortholog | many-to-1 | LJ1G018200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G014350 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G112380 MD00G170890 MD00G394130 ... | 5 | |
Tree-based ortholog | many-to-many | MD00G171330 MD13G024200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G049110 MD10G013870 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME09570G00160 | 1 | |
Tree-based ortholog | many-to-many | ME07683G00070 ME06948G00150 ME09150G00020 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME09150G00020 ME06948G00150 ME06948G00140 ... | 4 | ||
Medicago truncatula | Tree-based ortholog | many-to-1 | MT3G095530 | 1 | |
Anchor point | 1-to-1 | MT3G095530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G095530 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G64630 OS01G73310 OS05G01600 ... | 8 | |
Tree-based ortholog | many-to-many | OS04G57210 OS01G16414 OS08G04280 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G50885 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL15G00240 | 1 | |
Tree-based ortholog | many-to-many | OL15G00240 OL08G01220 OL04G02560 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL15G00240 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00198G00820 PP00198G00830 PP00372G00340 ... | 5 | |
Tree-based ortholog | many-to-many | PP00062G00380 PP00066G01030 PP00238G00340 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00337G00130 PP00198G00820 PP00381G00090 ... | 8 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G45360 PT06G13990 PT11G14800 ... | 4 | |
Tree-based ortholog | many-to-many | PT19G01040 PT01G30950 | 2 | ||
Anchor point | 1-to-1 | PT12G06130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G30950 | 1 | ||
Prunus persica | Tree-based ortholog | many-to-1 | PPE_004G32900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G22640 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29739G01660 RC30003G00090 | 2 | |
Tree-based ortholog | many-to-many | RC30206G00090 RC29836G00060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC29836G00060 RC30206G00090 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL00G017210 SL04G071260 SL10G086460 | 3 | |
Tree-based ortholog | many-to-many | SL03G078400 SL11G005330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G080500 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G041800 ST04G010120 ST04G023590 ... | 11 | |
Tree-based ortholog | many-to-many | ST03G020330 ST11G006340 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G022240 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G28660 TP1G36120 TP3G16870 ... | 4 | |
Tree-based ortholog | many-to-many | TP3G16870 TP1G36120 | 2 | ||
Anchor point | 1-to-many | TP3G16870 TP1G36120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G16870 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G11740 TC0002G04200 TC0009G07030 ... | 4 | |
Tree-based ortholog | many-to-1 | TC0001G11740 | 1 | ||
Anchor point | 1-to-1 | TC0001G11740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0009G31710 TC0005G03850 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV11G02290 | 1 | |
Tree-based ortholog | many-to-many | VV08G09160 VV04G05680 VV12G01020 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G05310 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G40420 ZM01G58850 ZM03G25940 ... | 5 | |
Tree-based ortholog | many-to-many | ZM02G01120 ZM10G06350 ZM01G00770 ... | 15 | ||
Anchor point | 1-to-1 | ZM03G25940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G05300 ZM01G50940 | 2 |