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Integrative Orthology Viewer:
AT1G28050
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G28050 AT2G33500 | 2 |  |
| Tree-based ortholog | AT1G28050 | 1 | ||
| Anchor point | AT2G33500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G28050 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00016G01300 ATR_00016G01310 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00016G01300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00016G01300 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G29190 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G29190 | 1 | ||
| Anchor point | 1-to-many | AL4G18740 AL1G29190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G29190 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV6G10810 | 1 | |
| Tree-based ortholog | 1-to-many | BV6G10810 BV6G00980 | 2 | ||
| Anchor point | 1-to-1 | BV6G10810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G10810 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G10640 BR08G22060 | 2 | |
| Tree-based ortholog | 1-to-1 | BR07G07130 | 1 | ||
| Anchor point | 1-to-many | BR08G22060 BR07G07130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G22060 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G14630 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_004G14630 | 1 | ||
| Anchor point | 1-to-1 | CRU_004G14630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G14630 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00123G00570 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00123G00570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00123G00570 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G08600 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G18010 | 1 | |
| Tree-based ortholog | 1-to-1 | CL07G18010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G18010 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00003G05350 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00003G05350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G05350 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00031G02250 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00031G02250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00031G02250 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G29490 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G29490 | 1 | ||
| Anchor point | 1-to-1 | EG0002G29490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G29490 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV6G32990 FV1G16080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G13620 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM19G27240 GM16G05540 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G17181 GM19G39460 GM10G02621 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR02G02230 | 1 | |
| Tree-based ortholog | 1-to-1 | GR02G02230 | 1 | ||
| Anchor point | 1-to-many | GR02G02230 GR05G19580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G02230 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G051920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G068490 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD13G009730 MD13G015860 | 2 | |
| Tree-based ortholog | 1-to-many | MD13G015860 MD13G009730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G015860 MD13G009730 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02264G00360 ME08757G00110 | 2 | |
| Tree-based ortholog | 1-to-many | ME08757G00110 ME02264G00360 | 2 | ||
| Anchor point | 1-to-many | ME08757G00110 ME02264G00360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08757G00110 ME02264G00360 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G083540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G083540 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS08G42440 | 1 | |
| Tree-based ortholog | 1-to-many | OS08G42440 OS09G33550 OS03G22770 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS08G42440 OS09G33550 | 2 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL07G00880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G03530 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00036G01230 PP00026G00030 PP00195G00390 ... | 4 | |
| Anchor point | 1-to-1 | PP00036G01230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00036G01230 PP00195G00390 PP00026G00030 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G06180 PT03G16600 | 2 | |
| Tree-based ortholog | 1-to-many | PT01G06180 PT03G16600 | 2 | ||
| Anchor point | 1-to-1 | PT03G16600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G16600 PT01G06180 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G22870 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G22870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G22870 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30128G04260 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30128G04260 | 1 | ||
| Anchor point | 1-to-1 | RC30128G04260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G04260 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G024010 | 1 | |
| Tree-based ortholog | 1-to-1 | SL05G024010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G024010 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST05G020710 | 1 | |
| Tree-based ortholog | 1-to-1 | ST05G020710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G020710 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G24230 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G24230 | 1 | ||
| Anchor point | 1-to-1 | TP1G24230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G24230 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G19200 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G19200 | 1 | ||
| Anchor point | 1-to-1 | TC0002G19200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G19200 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV01G00950 | 1 | |
| Tree-based ortholog | 1-to-1 | VV01G00950 | 1 | ||
| Anchor point | 1-to-1 | VV01G00950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G00950 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G34160 | 1 | |
| Tree-based ortholog | 1-to-many | ZM01G34160 ZM01G15420 ZM07G29630 ... | 7 | ||
| Anchor point | 1-to-1 | ZM01G34160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G34160 | 1 |