Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G18330
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G18330 AT3G10113 | 2 |  |
| Tree-based ortholog | AT1G18330 | 1 | ||
| Anchor point | AT4G01280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G10113 AT1G18330 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00044G00440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00044G00440 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G19230 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G19230 | 1 | ||
| Anchor point | 1-to-many | AL6G40300 AL1G19230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G19230 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G24170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G24170 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR06G13020 | 1 | |
| Tree-based ortholog | 1-to-1 | BR06G13020 | 1 | ||
| Anchor point | 1-to-many | BR09G01570 BR06G13020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR06G13020 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G17170 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G17170 | 1 | ||
| Anchor point | 1-to-many | CRU_006G35100 CRU_001G17170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G17170 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00178G00230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00114G00570 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR12G06800 CR06G05950 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR06G05950 CR12G06800 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G12280 | 1 | |
| Tree-based ortholog | 1-to-1 | CL04G12280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL04G12280 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00459G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00459G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00459G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00001G00510 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00001G00510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00001G00510 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G19140 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0011G19140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0011G19140 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G15780 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G15780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G15780 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM09G29800 GM16G34340 | 2 | |
| Tree-based ortholog | 1-to-many | GM09G29800 GM16G34340 GM14G39130 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM09G29800 GM16G34340 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G06970 GR08G29360 | 2 | |
| Tree-based ortholog | 1-to-many | GR08G29360 GR01G06970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G29360 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G008560 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ2G008560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G008560 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G359630 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G359630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G359630 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME07520G00540 ME07591G00030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07520G00540 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT6G477860 | 1 | |
| Tree-based ortholog | 1-to-many | MT6G477860 MT5G076960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT6G477860 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G46030 OS04G49450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G51260 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL06G02290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL06G02290 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00087G00550 PP00080G00890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00325G00330 PP00096G00790 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT12G03830 PT15G03040 | 2 | |
| Tree-based ortholog | 1-to-many | PT15G03040 PT12G03830 PT17G14480 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT15G03040 PT12G03830 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G24180 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G24180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G24180 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29677G00020 | 1 | |
| Tree-based ortholog | 1-to-many | RC29677G00020 RC30171G00140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29677G00020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G098320 | 1 | |
| Tree-based ortholog | 1-to-many | SL03G098320 SL02G036370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G098320 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G016340 | 1 | |
| Tree-based ortholog | 1-to-many | ST03G016340 ST02G008290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST03G016340 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G16290 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G16290 | 1 | ||
| Anchor point | 1-to-1 | TP1G16290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G16290 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G07060 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G07060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G07060 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV04G07060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV04G07060 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM04G21330 ZM05G36830 ZM10G21550 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G16320 | 1 |