Integrative Orthology Viewer: AL6G36110 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G12330 AL6G36110 | 2 | |
Tree-based ortholog | AL6G36110 | 1 | ||
Anchor point | AL1G12330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL6G36110 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00136G00320 | 1 | |
Tree-based ortholog | 1-to-many | ATR_00111G01310 ATR_00022G01120 ATR_00136G00320 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00136G00320 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G12000 AT4G04040 | 2 | |
Tree-based ortholog | 1-to-1 | AT4G04040 | 1 | ||
Anchor point | 1-to-1 | AT4G04040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G04040 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV8G12480 | 1 | |
Tree-based ortholog | 1-to-1 | BV8G12480 | 1 | ||
Anchor point | 1-to-1 | BV8G12480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G12480 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR06G08820 BR09G24390 | 2 | |
Tree-based ortholog | 1-to-1 | BR09G24390 | 1 | ||
Anchor point | 1-to-1 | BR09G24390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G24390 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G11080 CRU_006G30870 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_006G30870 | 1 | ||
Anchor point | 1-to-many | CRU_006G30870 CRU_001G11080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G30870 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP01180G00030 | 1 | |
Tree-based ortholog | 1-to-many | CP24967G00050 CP01180G00030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01180G00030 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR06G03260 CR12G14330 | 2 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G15980 CL01G21750 | 2 | |
Tree-based ortholog | 1-to-many | CL11G13000 CL01G21750 CL01G15980 | 3 | ||
Anchor point | 1-to-1 | CL01G21750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G15980 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00007G03320 CS00126G00100 CS00126G00130 | 3 | |
Tree-based ortholog | 1-to-many | CS00002G07260 CS00126G00100 CS00126G00130 ... | 4 | ||
Anchor point | 1-to-1 | CS00007G03320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G03320 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00007G04460 CM00049G00590 | 2 | |
Tree-based ortholog | 1-to-many | CM00029G04470 CM00007G04460 CM00049G00590 | 3 | ||
Anchor point | 1-to-1 | CM00007G04460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G04460 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0005G30000 EG0011G06470 | 2 | |
Tree-based ortholog | 1-to-many | EG0006G30750 EG0006G14910 EG0005G30000 ... | 4 | ||
Anchor point | 1-to-1 | EG0005G30000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G30000 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G01710 FV6G39880 | 2 | |
Tree-based ortholog | 1-to-many | FV5G28200 FV3G01710 FV6G39880 | 3 | ||
Anchor point | 1-to-1 | FV3G01710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G01710 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G39380 GM09G01050 GM15G11890 ... | 4 | |
Tree-based ortholog | 1-to-1 | GM18G18360 | 1 | ||
Anchor point | 1-to-many | GM17G01361 GM15G11890 GM07G39380 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G01361 GM07G39380 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G17090 GR10G18430 GR11G01160 | 3 | |
Tree-based ortholog | 1-to-many | GR05G11560 GR11G01160 GR10G18430 ... | 4 | ||
Anchor point | 1-to-many | GR10G18430 GR11G01160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G18430 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G001610 | 1 | |
Tree-based ortholog | 1-to-many | LJ2G001790 LJ4G001610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G001790 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G028210 MD00G426030 MD05G001120 ... | 5 | |
Tree-based ortholog | 1-to-many | MD00G426030 MD05G001120 | 2 | ||
Anchor point | 1-to-1 | MD10G027010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G028210 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06598G00520 ME08402G00020 | 2 | |
Tree-based ortholog | 1-to-1 | ME08402G00020 | 1 | ||
Anchor point | 1-to-1 | ME06598G00520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06598G00520 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G025020 MT4G132700 | 2 | |
Tree-based ortholog | 1-to-many | MT1G035230 MT4G132700 MT2G025020 | 3 | ||
Anchor point | 1-to-many | MT4G132700 MT2G025020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G132700 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G13810 | 1 | |
Tree-based ortholog | 1-to-1 | OS06G13810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G13810 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G00340 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00124G00340 PP00163G00140 | 2 | |
Tree-based ortholog | 1-to-many | PP00183G00310 PP00163G00140 PP00124G00340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00124G00340 PP00163G00140 PP00183G00310 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G00380 PT11G01590 | 2 | |
Tree-based ortholog | 1-to-many | PT02G00310 PT05G25780 PT11G01590 ... | 5 | ||
Anchor point | 1-to-many | PT11G01560 PT04G00380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT11G01590 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G19200 PPE_004G01350 | 2 | |
Tree-based ortholog | 1-to-many | PPE_005G00370 PPE_004G01350 PPE_003G19200 | 3 | ||
Anchor point | 1-to-many | PPE_004G01350 PPE_003G19200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G01350 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29842G00240 | 1 | |
Tree-based ortholog | 1-to-many | RC30170G07460 RC29842G00240 | 2 | ||
Anchor point | 1-to-1 | RC29842G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29842G00240 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G081160 SL07G049280 | 2 | |
Tree-based ortholog | 1-to-many | SL04G082880 SL12G095760 SL02G081160 ... | 4 | ||
Anchor point | 1-to-many | SL07G049280 SL02G081160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G081160 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G024270 ST07G018470 | 2 | |
Tree-based ortholog | 1-to-many | ST04G036410 ST12G028110 ST02G024270 ... | 4 | ||
Anchor point | 1-to-1 | ST07G018470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G024270 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G10670 TP6G04690 | 2 | |
Tree-based ortholog | 1-to-1 | TP6G04690 | 1 | ||
Anchor point | 1-to-1 | TP6G04690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G10670 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G17580 TC0006G22140 | 2 | |
Tree-based ortholog | 1-to-many | TC0008G09470 TC0006G22140 TC0001G17580 | 3 | ||
Anchor point | 1-to-1 | TC0006G22140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G22140 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G24060 VV12G11300 | 2 | |
Tree-based ortholog | 1-to-many | VV18G12910 VV12G11300 VV00G24060 | 3 | ||
Anchor point | 1-to-1 | VV12G11300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G24060 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G17040 ZM09G00300 | 2 | |
Tree-based ortholog | 1-to-many | ZM06G17040 ZM09G00300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G17040 | 1 |