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Integrative Orthology Viewer:
AL6G27920
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL3G05000 AL6G27920 | 2 |  |
| Tree-based ortholog | AL6G27920 | 1 | ||
| Anchor point | AL1G08520 AL3G04960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL6G27920 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00019G04470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00019G04440 ATR_00103G00380 ATR_00019G04460 | 3 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G05165 AT3G05400 | 2 | |
| Tree-based ortholog | 1-to-1 | AT5G27360 | 1 | ||
| Anchor point | many-to-many | AT5G27350 AT1G08890 AT3G05150 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G27360 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV5G17370 BV0G73070 | 2 | |
| Anchor point | many-to-1 | BV0G73070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G73070 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR02G35880 BR02G35900 BR02G35910 | 3 | |
| Anchor point | many-to-many | BR08G29570 BR02G35880 BR06G27820 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G35910 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_006G24420 CRU_006G24410 | 2 | |
| Anchor point | many-to-many | CRU_006G24410 CRU_001G07830 CRU_003G04230 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G24420 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP01088G00040 CP00048G00010 CP36372G00020 ... | 5 | |
| Anchor point | many-to-1 | CP00048G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01088G00040 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G12890 | 1 | |
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL03G16340 CL03G16330 | 2 | |
| Anchor point | many-to-many | CL03G16330 CL05G06370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G16330 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00573G00050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00407G00170 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00025G01330 | 1 | |
| Anchor point | many-to-many | CM00025G01320 CM00047G02540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G01330 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0002G16020 EG0002G16030 EG0002G15970 ... | 15 | |
| Anchor point | many-to-many | EG0008G35990 EG0002G15950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0002G16050 EG0002G16010 EG0002G16030 ... | 13 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV6G06830 FV6G06700 FV6G06810 ... | 9 | |
| Anchor point | many-to-1 | FV6G06680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV6G06690 FV6G06810 | 2 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM19G42710 GM03G40121 GM19G42740 ... | 6 | |
| Anchor point | many-to-many | GM17G02461 GM19G42690 GM03G40100 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G42740 GM03G40100 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR07G29310 | 1 | |
| Anchor point | many-to-many | GR13G20380 GR07G29220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G29310 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G072710 | 1 | |
| Anchor point | many-to-1 | LJ1G072710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G072710 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G002890 MD00G441520 MD00G255800 | 3 | |
| Anchor point | many-to-many | MD12G022720 MD04G017200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD11G027110 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME03614G04260 ME04285G00100 | 2 | |
| Anchor point | many-to-many | ME04285G00080 ME03614G04240 ME01551G02980 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03614G04260 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT7G113970 MT7G113960 | 2 | |
| Anchor point | many-to-1 | MT7G113960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G113960 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G24870 OS03G24860 OS11G42430 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G42430 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G01710 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00101G00090 PP00334G00220 PP00438G00080 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00101G00090 PP00334G00220 PP00438G00080 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT05G03700 PT05G03730 PT13G02770 ... | 6 | |
| Anchor point | many-to-1 | PT13G02750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT05G03990 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_006G33590 | 1 | |
| Anchor point | many-to-1 | PPE_006G33590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G33590 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC30128G01100 RC30128G01090 | 2 | |
| Anchor point | many-to-1 | RC30128G01080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G01110 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL10G062100 | 1 | |
| Anchor point | many-to-1 | SL01G098490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G098560 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST02G007030 ST01G036150 ST01G036160 | 3 | |
| Anchor point | many-to-1 | ST01G036150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G036250 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP2G20560 | 1 | |
| Anchor point | many-to-many | TP1G07520 TP3G03970 TP2G20560 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G04010 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0005G29710 | 1 | |
| Anchor point | many-to-1 | TC0005G29650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G29710 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV14G04820 VV14G04780 VV14G04770 ... | 6 | |
| Anchor point | many-to-many | VV14G04870 VV05G03730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV14G04820 VV14G04830 VV14G04780 ... | 4 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G16190 ZM01G16180 ZM03G08020 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G16190 | 1 |