Integrative Orthology Viewer: AL4G27140 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL4G27140 AL6G05060 | 2 | |
Tree-based ortholog | AL4G27140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL4G27140 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00109G01260 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00109G01260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00109G01260 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G40290 AT5G05470 | 2 | |
Tree-based ortholog | 1-to-1 | AT2G40290 | 1 | ||
Anchor point | N/A | AT2G40290 AT5G05470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G40290 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV7G07800 | 1 | |
Tree-based ortholog | 1-to-1 | BV7G07800 | 1 | ||
Anchor point | N/A | BV7G07800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G07800 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G20300 BR04G23970 BR05G05600 | 3 | |
Tree-based ortholog | 1-to-1 | BR03G20300 | 1 | ||
Anchor point | N/A | BR05G05600 BR04G23970 BR03G20300 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G20300 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_004G21800 CRU_006G04260 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_004G21800 | 1 | ||
Anchor point | N/A | CRU_004G21800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G21800 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00001G01840 | 1 | |
Tree-based ortholog | 1-to-1 | CP00001G01840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G01840 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G01820 | 1 | |
Tree-based ortholog | 1-to-1 | CR12G01820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G01820 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL09G15800 | 1 | |
Tree-based ortholog | 1-to-1 | CL09G15800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G15800 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00021G00190 | 1 | |
Tree-based ortholog | 1-to-1 | CS00021G00190 | 1 | ||
Anchor point | N/A | CS00021G00190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G00190 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00017G01770 | 1 | |
Tree-based ortholog | 1-to-1 | CM00017G01770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00017G01770 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G24600 | 1 | |
Tree-based ortholog | 1-to-1 | EG0007G24600 | 1 | ||
Anchor point | N/A | EG0007G24600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G24600 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G30100 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G30100 | 1 | ||
Anchor point | N/A | FV7G30100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G30100 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM11G35600 GM18G02820 | 2 | |
Tree-based ortholog | 1-to-many | GM11G35600 GM18G02820 | 2 | ||
Anchor point | N/A | GM18G02820 GM11G35600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G02820 GM11G35600 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G21040 GR08G24290 | 2 | |
Tree-based ortholog | 1-to-many | GR08G24290 GR06G21040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G24290 GR06G21040 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G324590 MD00G484450 | 2 | |
Tree-based ortholog | 1-to-many | MD00G432490 MD00G324590 MD00G484450 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G484450 MD00G324590 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02831G00100 ME03542G00090 | 2 | |
Tree-based ortholog | 1-to-many | ME03542G00090 ME02831G00100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02831G00100 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G071540 MT3G071550 MT3G071560 | 3 | |
Tree-based ortholog | 1-to-many | MT3G071540 MT3G071560 MT3G071550 | 3 | ||
Anchor point | N/A | MT3G071540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G071550 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G18510 OS07G49220 | 2 | |
Tree-based ortholog | 1-to-many | OS03G18510 OS07G49220 | 2 | ||
Anchor point | N/A | OS03G18510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G18510 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL02G04070 OL02G04080 | 2 | |
Tree-based ortholog | 1-to-many | OL02G04070 OL02G04080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G04070 OL02G04080 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00055G01490 PP00352G00100 | 2 | |
Tree-based ortholog | 1-to-many | PP00055G01490 PP00352G00100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00055G01490 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G07250 PT10G18490 | 2 | |
Tree-based ortholog | 1-to-many | PT08G07250 PT10G18490 | 2 | ||
Anchor point | N/A | PT08G07250 PT10G18490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G07250 PT10G18490 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G24490 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_002G24490 | 1 | ||
Anchor point | N/A | PPE_002G24490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G24490 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29607G00070 | 1 | |
Tree-based ortholog | 1-to-1 | RC29607G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29607G00070 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G095840 | 1 | |
Tree-based ortholog | 1-to-1 | SL03G095840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G095840 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G020970 | 1 | |
Tree-based ortholog | 1-to-1 | ST03G020970 | 1 | ||
Anchor point | N/A | ST03G020940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G020970 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G22620 | 1 | |
Tree-based ortholog | 1-to-1 | TP4G22620 | 1 | ||
Anchor point | N/A | TP4G22620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G22620 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G26570 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G26570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G26570 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV06G01290 | 1 | |
Tree-based ortholog | 1-to-many | VV13G10010 VV06G01290 | 2 | ||
Anchor point | N/A | VV06G01290 VV13G10010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G01290 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G12560 ZM09G23010 | 2 | |
Tree-based ortholog | 1-to-many | ZM09G23010 ZM01G12560 | 2 | ||
Anchor point | N/A | ZM01G12560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G23010 ZM01G12560 | 2 |