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Integrative Orthology Viewer:
AL3G28620
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL0G03610 AL3G28620 | 2 |  |
| Tree-based ortholog | AL3G28620 | 1 | ||
| Anchor point | AL0G03610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL3G28620 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00228G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00228G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00228G00010 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G25040 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G25040 | 1 | ||
| Anchor point | 1-to-1 | AT3G25040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G25040 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G14940 | 1 | |
| Tree-based ortholog | 1-to-1 | BV7G14940 | 1 | ||
| Anchor point | 1-to-1 | BV7G14940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G14940 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR03G38170 | 1 | |
| Tree-based ortholog | 1-to-1 | BR03G38170 | 1 | ||
| Anchor point | 1-to-1 | BR03G38170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G38170 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G24350 CRU_007G28400 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_003G24350 | 1 | ||
| Anchor point | 1-to-many | CRU_007G28400 CRU_003G24350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G24350 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00008G01310 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00008G01310 | 1 | ||
| Anchor point | 1-to-1 | CP00008G01310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00008G01310 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G11050 | 1 | |
| Tree-based ortholog | 1-to-1 | CR01G11050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G11050 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G07720 | 1 | |
| Tree-based ortholog | 1-to-1 | CL06G07720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G07720 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00559G00070 | 1 | |
| Tree-based ortholog | 1-to-many | CS07813G00010 CS00559G00070 | 2 | ||
| Anchor point | 1-to-1 | CS00029G00710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00559G00070 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00043G01070 CM00102G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00102G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00102G00010 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G06750 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0008G06750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G06750 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G14660 | 1 | |
| Tree-based ortholog | 1-to-1 | FV2G14660 | 1 | ||
| Anchor point | 1-to-1 | FV2G14660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G14660 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM08G46570 GM18G35390 | 2 | |
| Tree-based ortholog | 1-to-many | GM08G46570 GM18G35390 | 2 | ||
| Anchor point | 1-to-many | GM03G20420 GM08G46570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G35390 GM08G46570 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR05G03230 | 1 | |
| Tree-based ortholog | 1-to-1 | GR01G18790 | 1 | ||
| Anchor point | 1-to-1 | GR01G18790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G03230 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G042210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G042210 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G090170 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G090170 MD05G015780 MD00G411040 | 3 | ||
| Anchor point | 1-to-1 | MD05G015780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G090170 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02421G00590 ME07827G00010 | 2 | |
| Tree-based ortholog | 1-to-many | ME07827G00010 ME02421G00590 | 2 | ||
| Anchor point | 1-to-1 | ME02421G00590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07827G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G056337 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G056337 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G056337 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS11G28340 | 1 | |
| Tree-based ortholog | 1-to-many | OS11G28340 OS04G30800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G28340 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL02G02570 OL02G02580 | 2 | |
| Tree-based ortholog | 1-to-many | OL02G02570 OL02G02580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G02570 OL02G02580 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00029G00510 PP00258G00400 | 2 | |
| Tree-based ortholog | 1-to-many | PP00258G00400 PP00029G00510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00029G00510 PP00258G00400 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G31580 PT17G05600 | 2 | |
| Tree-based ortholog | 1-to-many | PT01G31580 PT17G05600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G05600 PT01G31580 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_008G21660 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_008G21660 PPE_001G00910 | 2 | ||
| Anchor point | 1-to-1 | PPE_008G21660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G21660 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29904G00460 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29904G00460 | 1 | ||
| Anchor point | 1-to-1 | RC29904G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29904G00460 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G091900 | 1 | |
| Tree-based ortholog | 1-to-1 | SL09G091900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G091900 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G028570 | 1 | |
| Tree-based ortholog | 1-to-1 | ST09G028570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G028570 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G22640 TP7G10460 | 2 | |
| Tree-based ortholog | 1-to-1 | TP3G22640 | 1 | ||
| Anchor point | 1-to-many | TP3G22640 TP7G10460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G10460 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G20720 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G21860 | 1 | ||
| Anchor point | 1-to-1 | TC0001G21860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G20720 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV05G07380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G02530 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM08G19690 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G22520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G28930 | 1 |