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Integrative Orthology Viewer:
AL2G17060
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G19380 AL2G17060 AL2G22830 | 3 |  |
| Tree-based ortholog | AL2G17060 | 1 | ||
| Anchor point | AL2G22810 AL1G19380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL2G17060 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00010G00430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G00430 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G18470 AT1G68820 AT1G73950 | 3 | |
| Tree-based ortholog | 1-to-1 | AT1G68820 | 1 | ||
| Anchor point | many-to-many | AT1G18470 AT1G68820 AT1G73930 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G68820 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G58750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G58750 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR07G25780 BR07G29660 BR09G46150 | 3 | |
| Tree-based ortholog | 1-to-many | BR02G19420 BR02G19430 BR07G25780 | 3 | ||
| Anchor point | many-to-many | BR06G13120 BR07G29660 BR07G25780 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G25780 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G17320 CRU_002G14500 CRU_002G19550 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_002G14500 | 1 | ||
| Anchor point | many-to-many | CRU_002G14500 CRU_001G17320 CRU_002G19530 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G14500 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00053G01160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00053G01160 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR14G05970 | 1 | |
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G15550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G15550 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00019G00770 | 1 | |
| Anchor point | many-to-1 | CS00019G00770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G00770 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00030G02170 | 1 | |
| Anchor point | many-to-1 | CM00030G02170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00030G02170 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G22160 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G25010 | 1 | ||
| Anchor point | many-to-1 | EG0002G25010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G25010 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G02440 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G02440 | 1 | ||
| Anchor point | many-to-1 | FV0G02440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G10760 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM05G07960 GM17G13040 | 2 | |
| Tree-based ortholog | 1-to-many | GM10G34710 GM20G32670 | 2 | ||
| Anchor point | many-to-many | GM20G32670 GM06G23447 GM05G07960 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G32670 GM10G34710 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G06320 | 1 | |
| Tree-based ortholog | 1-to-many | GR05G13780 GR13G07990 | 2 | ||
| Anchor point | many-to-1 | GR13G07990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G13780 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G030560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G030560 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD13G003070 MD16G002070 | 2 | |
| Tree-based ortholog | 1-to-many | MD13G003070 MD00G197570 MD00G111630 ... | 4 | ||
| Anchor point | many-to-many | MD16G002070 MD13G003060 MD14G020790 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD14G020790 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01686G00010 ME07762G00390 | 2 | |
| Tree-based ortholog | 1-to-many | ME06656G00080 ME08359G00570 | 2 | ||
| Anchor point | many-to-many | ME06656G00080 ME08359G00570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07762G00390 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G111965 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G093730 | 1 | ||
| Anchor point | many-to-1 | MT1G093730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G093730 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS03G49900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G49900 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00079G00750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00079G00750 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT08G11640 | 1 | |
| Anchor point | many-to-many | PT10G12990 PT08G11640 PT12G06010 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G05030 PT12G06010 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G22000 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G31520 | 1 | ||
| Anchor point | many-to-many | PPE_005G22000 PPE_001G31520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G31520 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30174G03990 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29738G00450 | 1 | ||
| Anchor point | many-to-many | RC30174G03980 RC29738G00450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29738G00450 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G119760 | 1 | |
| Tree-based ortholog | 1-to-1 | SL05G009870 | 1 | ||
| Anchor point | many-to-1 | SL05G009870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G009870 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G033310 | 1 | |
| Tree-based ortholog | 1-to-1 | ST05G007450 | 1 | ||
| Anchor point | many-to-1 | ST05G007450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G007450 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G16410 TP5G29150 | 2 | |
| Tree-based ortholog | 1-to-1 | TP5G23930 | 1 | ||
| Anchor point | many-to-many | TP5G23930 TP1G16410 TP5G29130 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G23930 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G02670 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G35930 | 1 | ||
| Anchor point | many-to-1 | TC0002G35930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G35930 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV17G05590 | 1 | |
| Tree-based ortholog | 1-to-1 | VV01G08280 | 1 | ||
| Anchor point | many-to-many | VV01G08280 VV17G05610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G08280 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G50110 ZM05G05780 ZM07G13740 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G05780 ZM01G50110 | 2 |