Integrative Orthology Viewer: AL1G18900 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G18900 | 1 | |
Tree-based ortholog | AL1G18900 | 1 | ||
Anchor point | AL2G22640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL1G18900 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00019G03440 ATR_00144G00130 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00021G01500 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G17970 | 1 | |
Tree-based ortholog | 1-to-1 | AT1G17970 | 1 | ||
Anchor point | 1-to-many | AT1G73760 AT1G17970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G17970 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G31970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G31970 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR08G26220 | 1 | |
Tree-based ortholog | 1-to-1 | BR08G26220 | 1 | ||
Anchor point | 1-to-many | BR07G29510 BR08G26220 BR07G20710 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G26220 | 1 | ||
Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_001G16900 | 1 | |
Anchor point | 1-to-many | CRU_002G19350 CRU_001G16900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G16900 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00003G04550 | 1 | |
Anchor point | 1-to-1 | CP00003G04550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G04550 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR10G05410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G05410 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL04G10730 | 1 | |
Anchor point | 1-to-1 | CL04G10730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G10730 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00228G00080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00228G00080 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00001G02040 | 1 | |
Anchor point | 1-to-1 | CM00001G02040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G02040 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0002G06890 | 1 | |
Anchor point | 1-to-1 | EG0002G06890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G06890 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV5G17360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G17360 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM08G05410 GM05G34270 GM07G10930 ... | 4 | |
Anchor point | 1-to-many | GM05G34270 GM08G05410 GM09G31170 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G34270 GM08G05410 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR06G05850 GR01G06770 | 2 | |
Anchor point | 1-to-1 | GR06G05850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G06770 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G010710 | 1 | |
Anchor point | 1-to-1 | LJ4G050760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G010710 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD06G018510 MD00G103910 | 2 | |
Anchor point | 1-to-1 | MD06G018510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G103910 | 1 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME12711G00180 ME08356G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08356G00010 ME12711G00180 | 2 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G106240 MT6G082620 | 2 | |
Anchor point | 1-to-1 | MT8G106240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G106240 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS05G47670 OS01G49770 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G49770 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G02390 | 1 | |
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00254G00180 PP00162G00360 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00162G00360 PP00254G00180 | 2 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT12G05380 PT15G04390 | 2 | |
Anchor point | 1-to-1 | PT15G04390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G04390 PT12G05380 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_005G22760 | 1 | |
Anchor point | 1-to-1 | PPE_005G22760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G22760 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29747G00430 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29747G00430 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL12G040390 SL03G118840 | 2 | |
Anchor point | 1-to-many | SL03G118840 SL12G040390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G118840 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST05G008810 ST03G032360 | 2 | |
Anchor point | 1-to-1 | ST03G032360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G032360 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G16030 | 1 | |
Tree-based ortholog | 1-to-1 | TP1G16030 | 1 | ||
Anchor point | 1-to-many | TP5G28950 TP1G16030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G16030 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0003G04180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G04180 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV17G06440 | 1 | |
Anchor point | 1-to-1 | VV17G06440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G06440 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM06G30300 ZM03G34270 ZM08G25960 | 3 | |
Anchor point | 1-to-1 | ZM07G19860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G30300 | 1 |