Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Spipo1G0082400	Spirodela polyrhiza	HOM04x5M008198	ORTHO04x5M003749	1.4e-161	571.6	298	100.0
GSVIVG01018179001	Vitis vinifera	HOM04x5M005849	ORTHO04x5M003749	2.9e-34	148.7	297	36.7
Solyc01g090770.2	Solanum lycopersicum	HOM04x5M005849	ORTHO04x5M003749	8.1e-29	130.6	247	33.2
Potri.002G142900	Populus trichocarpa	HOM04x5M005849	ORTHO04x5M003749	8.4e-26	120.6	268	34.0
AT2G45060	Arabidopsis thaliana	HOM04x5M005849	ORTHO04x5M003749	1.2e-21	106.7	295	29.8
Potri.014G058700	Populus trichocarpa	HOM04x5M005849	ORTHO04x5M003749	2.4e-20	102.4	251	31.9
Zosma76g00410	Zostera marina	HOM04x5M005849	ORTHO04x5M003749	5.3e-20	101.3	245	30.2
Aco017512	Ananas comosus	HOM04x5M008198	ORTHO04x5M003749	6.6e-15	84.3	240	27.9
PEQU_28658	Phalaenopsis equestris	HOM04x5M008198	ORTHO04x5M003749	1.9e-14	82.8	245	31.8
Pp3c23_11620	Physcomitrium patens	HOM04x5M005849	ORTHO04x5M003749	1.8e-12	76.3	250	26.8
ATR0317G006	Amborella trichopoda	HOM04x5M008198	ORTHO04x5M003749	3.1e-12	75.5	102	39.2
p5.00_sc00122_p0052	Elaeis guineensis	HOM04x5M008198	ORTHO04x5M003749	3.1e-12	75.5	243	26.3
CALSI_Maker00035087	Calamus simplicifolius	HOM04x5M008198	ORTHO04x5M003749	6.9e-12	74.3	249	29.3
Mapoly0004s0186	Marchantia polymorpha	HOM04x5M005849	ORTHO04x5M003749	2.0e-11	72.8	249	24.1
Pp3c20_17010	Physcomitrium patens	HOM04x5M005849	ORTHO04x5M003749	2.9e-10	68.9	225	25.8
Ma03_g13820	Musa acuminata	HOM04x5M008198	ORTHO04x5M003749	7.1e-09	64.3	186	29.0
Misin07G005300	Miscanthus sinensis	HOM04x5M008198	ORTHO04x5M003749	2.1e-08	62.8	184	27.7
Misin08G001800	Miscanthus sinensis	HOM04x5M008198	ORTHO04x5M003749	7.9e-08	60.8	184	27.2
Seita.1G003900	Setaria italica	HOM04x5M008198	ORTHO04x5M003749	3.0e-07	58.9	184	26.6
TraesCS6B02G021700	Triticum aestivum	HOM04x5M008198	ORTHO04x5M003749	3.9e-07	58.5	184	27.7
TraesCS6D02G017900	Triticum aestivum	HOM04x5M008198	ORTHO04x5M003749	3.9e-07	58.5	184	27.7
OB02G10420	Oryza brachyantha	HOM04x5M008198	ORTHO04x5M003749	6.7e-07	57.8	184	26.1
LOC_Os02g01450	Oryza sativa ssp. japonica	HOM04x5M008198	ORTHO04x5M003749	6.7e-07	57.8	184	27.2
TraesCS6A02G015100	Triticum aestivum	HOM04x5M008198	ORTHO04x5M003749	6.7e-07	57.8	184	27.7
TRITD6Av1G002380	Triticum turgidum	HOM04x5M008198	ORTHO04x5M003749	6.7e-07	57.8	184	27.7
Zm00007a00032446	Zea mays B104	HOM04x5M008198	ORTHO04x5M003749	6.7e-07	57.8	190	29.5
OB08G11520	Oryza brachyantha	HOM04x5M008198	ORTHO04x5M003749	1.1e-06	57.0	184	26.6
Bradi3g00767	Brachypodium distachyon	HOM04x5M008198	ORTHO04x5M003749	2.5e-06	55.8	184	26.6
LP031940	Lolium perenne	HOM04x5M008198	ORTHO04x5M003749	2.5e-06	55.8	184	26.6

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment