Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
CALSI_Maker00048187	Calamus simplicifolius	HOM04x5M001523	ORTHO04x5M016727	4.0e-59	229.9	122	100.0
p5.00_sc00211_p0002	Elaeis guineensis	HOM04x5M001523	ORTHO04x5M016727	2.8e-20	100.9	77	76.6
evm.TU.AsparagusV1_02.2052.V1.1	Asparagus officinalis	HOM04x5M001523	ORTHO04x5M001589	7.6e-18	92.8	97	57.7
ASH_gene8571	Apostasia shenzhenica	HOM04x5M001523	ORTHO04x5M016727	8.5e-17	89.4	79	64.6
Bradi2g36005	Brachypodium distachyon	HOM04x5M001523	ORTHO04x5M001589	6.9e-11	69.7	107	43.0
LOC_Os05g05580	Oryza sativa ssp. japonica	HOM04x5M001523	ORTHO04x5M001589	2.2e-09	64.7	106	43.4
Oropetium_20150105_15532	Oropetium thomaeum	HOM04x5M001523	ORTHO04x5M001589	2.2e-09	64.7	101	45.5
Solyc03g118390.2	Solanum lycopersicum	HOM04x5M001523	ORTHO04x5M001589	3.8e-09	63.9	90	46.7
Zosma5g01050	Zostera marina	HOM04x5M001523	ORTHO04x5M016727	8.5e-09	62.8	81	45.7
Aco027227	Ananas comosus	HOM04x5M001523	ORTHO04x5M001589	1.4e-08	62.0	70	52.9
OB05G13160	Oryza brachyantha	HOM04x5M001523	ORTHO04x5M001589	2.5e-08	61.2	102	40.2
PH01000002G3240	Phyllostachys edulis	HOM04x5M001523	ORTHO04x5M001589	2.5e-08	61.2	46	69.6
Zosma69g00810	Zostera marina	HOM04x5M001523	ORTHO04x5M001589	5.5e-08	60.1	93	43.0
LP007813	Lolium perenne	HOM04x5M001523	ORTHO04x5M001589	9.4e-08	59.3	99	41.4
TraesCS1D02G093800	Triticum aestivum	HOM04x5M001523	ORTHO04x5M001589	2.7e-07	57.8	86	47.7
GSVIVG01021966001	Vitis vinifera	HOM04x5M001523	ORTHO04x5M016727	3.6e-07	57.4	52	65.4
Zm00001d024833	Zea mays B73	HOM04x5M001523	ORTHO04x5M001589	6.1e-07	56.6	92	43.5
Zm00007a00006561	Zea mays B104	HOM04x5M001523	ORTHO04x5M001589	6.1e-07	56.6	92	43.5
Zm00008a037492	Zea mays PH207	HOM04x5M001523	ORTHO04x5M001589	6.1e-07	56.6	92	43.5
Solyc05g023770.2	Solanum lycopersicum	HOM04x5M001523	ORTHO04x5M001589	7.9e-07	56.2	80	51.2
TraesCS1B02G112600	Triticum aestivum	HOM04x5M001523	ORTHO04x5M001589	7.9e-07	56.2	86	47.7
TRITD1Bv1G044830	Triticum turgidum	HOM04x5M001523	ORTHO04x5M001589	7.9e-07	56.2	86	47.7
HORVU4Hr1G023390	Hordeum vulgare	HOM04x5M001523	ORTHO04x5M001589	1.8e-06	55.1	93	40.9
Seita.3G038900	Setaria italica	HOM04x5M001523	ORTHO04x5M001589	1.8e-06	55.1	73	46.6
Pp3c19_10380	Physcomitrium patens	HOM04x5M001523	ORTHO04x5M001589	2.3e-06	54.7	46	63.0
Bradi4g17917	Brachypodium distachyon	HOM04x5M001523	ORTHO04x5M001589	3.0e-06	54.3	107	34.6
Sspon.07G0013220-3D	Saccharum spontaneum	HOM04x5M001523	ORTHO04x5M001589	3.0e-06	54.3	113	36.3
TraesCS4B02G122700	Triticum aestivum	HOM04x5M001523	ORTHO04x5M001589	3.0e-06	54.3	93	39.8
TRITD4Bv1G050480	Triticum turgidum	HOM04x5M001523	ORTHO04x5M001589	3.0e-06	54.3	93	39.8
TraesCS4A02G192600	Triticum aestivum	HOM04x5M001523	ORTHO04x5M001589	3.9e-06	53.9	93	39.8
TRITD4Av1G154160	Triticum turgidum	HOM04x5M001523	ORTHO04x5M001589	3.9e-06	53.9	93	39.8
GSVIVG01004935001	Vitis vinifera	HOM04x5M001523	ORTHO04x5M001589	3.9e-06	53.9	74	47.3
OB11G21770	Oryza brachyantha	HOM04x5M001523	ORTHO04x5M001589	5.1e-06	53.5	93	39.8
LOC_Os11g31950	Oryza sativa ssp. japonica	HOM04x5M001523	ORTHO04x5M001589	6.7e-06	53.1	93	39.8
OsR498G1120235900.01	Oryza sativa ssp. indica	HOM04x5M001523	ORTHO04x5M001589	6.7e-06	53.1	93	39.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment