Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Aco016688	Ananas comosus	HOM04x5M009274	ORTHO04x5M011528	5.4e-35	149.4	96	100.0
Solyc11g066880.1	Solanum lycopersicum	HOM04x5M009274	ORTHO04x5M011528	1.5e-08	61.6	49	57.1
Aco007770	Ananas comosus	HOM04x5M009274	ORTHO04x5M011528	3.3e-08	60.5	41	73.2
GSVIVG01033785001	Vitis vinifera	HOM04x5M009274	ORTHO04x5M011528	1.3e-07	58.5	40	72.5
GSVIVG01031398001	Vitis vinifera	HOM04x5M009274	ORTHO04x5M011528	2.8e-07	57.4	44	68.2
Ma06_g18680	Musa acuminata	HOM04x5M009274	ORTHO04x5M011528	6.2e-07	56.2	40	70.0
Solyc06g074540.2	Solanum lycopersicum	HOM04x5M009274	ORTHO04x5M011528	6.2e-07	56.2	44	61.4
Solyc10g083580.1	Solanum lycopersicum	HOM04x5M009274	ORTHO04x5M011528	8.1e-07	55.8	40	67.5
Potri.004G188200	Populus trichocarpa	HOM04x5M009274	ORTHO04x5M011528	1.8e-06	54.7	54	57.4
ATR0820G192	Amborella trichopoda	HOM04x5M009274	ORTHO04x5M011528	4.0e-06	53.5	42	59.5
Ma10_g11410	Musa acuminata	HOM04x5M009274	ORTHO04x5M011528	4.0e-06	53.5	40	65.0
Misin14G038800	Miscanthus sinensis	HOM04x5M005227	ORTHO04x5M007713	9.0e-06	52.4	49	53.1
OB11G12500	Oryza brachyantha	HOM04x5M005227	ORTHO04x5M007713	9.0e-06	52.4	37	64.9
LOC_Os11g05190	Oryza sativa ssp. japonica	HOM04x5M005227	ORTHO04x5M007713	9.0e-06	52.4	44	59.1
OsR498G1119418100.01	Oryza sativa ssp. indica	HOM04x5M005227	ORTHO04x5M007713	9.0e-06	52.4	44	59.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment