Interactive Phylogenetics Module

Gene Id
Zm00001d048515

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d048515 Zea mays HOM04D006474 ORTHO04D007696 7.1e-165 582.8 291 100.0
GSVIVG01019803001 Vitis vinifera HOM04D006474 ORTHO04D007696 1.5e-69 266.2 225 57.8
Ciclev10016122m.g Citrus clementina HOM04D006474 ORTHO04D007696 1.2e-68 263.1 240 52.5
ATR0680G238 Amborella trichopoda HOM04D006474 ORTHO04D007696 2.1e-68 262.3 249 50.6
Cpa.g.sc39.21 Carica papaya HOM04D006474 ORTHO04D007696 2.1e-68 262.3 222 57.2
Potri.014G154900 Populus trichocarpa HOM04D006474 ORTHO04D007696 3.6e-68 261.5 268 51.5
Pbr011024.1.g Pyrus bretschneideri HOM04D006474 ORTHO04D007696 1.1e-67 260.0 264 51.5
THA.LOC104800995 Tarenaya hassleriana HOM04D006474 ORTHO04D007696 1.4e-67 259.6 228 53.9
Prupe.5G095100 Prunus persica HOM04D006474 ORTHO04D007696 2.0e-66 255.8 252 53.2
Migut.A00797 Erythranthe guttata HOM04D006474 ORTHO04D007696 2.6e-66 255.4 249 50.2
AL4G27880 Arabidopsis lyrata HOM04D006474 ORTHO04D007696 5.8e-66 254.2 226 52.7
MELO3C016345 Cucumis melo HOM04D006474 ORTHO04D007696 9.9e-66 253.4 228 54.4
Brara.C01653 Brassica rapa HOM04D006474 ORTHO04D007696 1.7e-65 252.7 225 54.2
Bo3g026700 Brassica oleracea HOM04D006474 ORTHO04D007696 2.2e-65 252.3 228 53.5
Carubv10023899m.g Capsella rubella HOM04D006474 ORTHO04D007696 2.2e-65 252.3 226 52.7
COL.COLO4_11251 Corchorus olitorius HOM04D006474 ORTHO04D007696 1.4e-64 249.6 292 46.2
ZJU.LOC107429939 Ziziphus jujuba HOM04D006474 ORTHO04D007696 1.4e-64 249.6 251 49.4
Tp4g14850 Schrenkiella parvula HOM04D006474 ORTHO04D007696 7.1e-64 247.3 226 51.8
Medtr8g096960 Medicago truncatula HOM04D006474 ORTHO04D007696 7.1e-64 247.3 226 53.1
C.cajan_11508.g Cajanus cajan HOM04D006474 ORTHO04D007696 9.2e-64 246.9 229 50.2
CAN.G26.17 Capsicum annuum HOM04D006474 ORTHO04D007696 1.6e-63 246.1 226 49.6
Eucgr.D01883 Eucalyptus grandis HOM04D006474 ORTHO04D007696 3.5e-63 245.0 227 52.4
Gorai.008G189400 Gossypium raimondii HOM04D006474 ORTHO04D007696 3.5e-63 245.0 229 51.5
Ca_05722.g Cicer arietinum HOM04D006474 ORTHO04D007696 7.8e-63 243.8 226 50.0
Cc08_g14300 Coffea canephora HOM04D006474 ORTHO04D007696 1.3e-62 243.0 224 52.2
AH018659 Amaranthus hypochondriacus HOM04D006474 ORTHO04D007696 2.3e-62 242.3 248 50.0
Bv5_100700_zcuq Beta vulgaris HOM04D006474 ORTHO04D007696 3.0e-62 241.9 280 46.8
DCAR_008412 Daucus carota HOM04D006474 ORTHO04D007696 5.1e-62 241.1 280 43.9
TPR.G12841 Trifolium pratense HOM04D006474 ORTHO04D007696 5.1e-62 241.1 226 51.8
PGSC0003DMG400004251 Solanum tuberosum HOM04D006474 ORTHO04D007696 6.6e-62 240.7 226 49.1
Glyma.05G205300 Glycine max HOM04D006474 ORTHO04D007696 1.9e-61 239.2 229 49.3
Glyma.08G012200 Glycine max HOM04D006474 ORTHO04D007696 2.8e-60 235.3 226 49.1
Manes.12G073000 Manihot esculenta HOM04D006474 ORTHO04D007696 3.6e-60 235.0 226 53.1
Solyc12g056350.1 Solanum lycopersicum HOM04D006474 ORTHO04D007696 4.7e-60 234.6 226 48.7
Cucsa.106890 Cucumis sativus L. HOM04D006474 ORTHO04D007696 8.1e-60 233.8 239 48.1
NNU_21048 Nelumbo nucifera HOM04D006474 ORTHO04D007696 1.3e-57 226.5 244 48.0
MDO.mRNA.g.408.1 Malus domestica HOM04D006474 ORTHO04D007696 3.8e-57 224.9 199 55.3
LOC_Os03g02020 Oryza sativa ssp. japonica HOM04D006474 ORTHO04D007696 1.2e-52 209.9 131 77.9
AUR62017243 Chenopodium quinoa HOM04D006474 ORTHO04D007696 3.6e-52 208.4 224 48.2
HBR0022G004 Hevea brasiliensis HOM04D006474 ORTHO04D007696 4.7e-52 208.0 216 50.0
AUR62010601 Chenopodium quinoa HOM04D000062 ORTHO04D007696 1.1e-51 206.8 196 53.1
Achn380191 Actinidia chinensis HOM04D006474 ORTHO04D007696 1.8e-51 206.1 215 49.3
Peaxi162Scf01294g00327 Petunia axillaris HOM04D006474 ORTHO04D007696 2.6e-50 202.2 225 44.9
AT2G32500 Arabidopsis thaliana HOM04D006474 ORTHO04D007696 6.6e-46 187.6 162 54.9
SMO329G0076 Selaginella moellendorffii HOM04D006474 ORTHO04D007696 2.4e-43 179.1 222 40.5
Pp3c20_8200 Physcomitrium patens HOM04D006474 ORTHO04D007696 1.1e-40 170.2 230 39.6
PAB00044629 Picea abies HOM04D006474 ORTHO04D007696 9.3e-40 167.2 182 46.2
FVE32428 Fragaria vesca HOM04D006474 ORTHO04D007696 4.5e-34 148.3 141 51.1
Mapoly0086s0010 Marchantia polymorpha HOM04D006474 ORTHO04D007696 1.7e-25 119.8 233 32.2
Vradi07g30290 Vigna radiata var. radiata HOM04D006474 ORTHO04D007696 3.8e-25 118.6 102 50.0
UGI.Scf00731.22012 Utricularia gibba HOM04D006474 ORTHO04D007696 3.5e-23 112.1 97 51.5
Mapoly0086s0005 Marchantia polymorpha HOM04D006474 ORTHO04D007696 6.7e-22 107.8 214 28.5
Potri.002G228100 Populus trichocarpa HOM04D006474 ORTHO04D007696 6.7e-22 107.8 91 58.2
Pp3c7_1410 Physcomitrium patens HOM04D006474 ORTHO04D007696 5.7e-21 104.8 204 28.9
AUR62042944 Chenopodium quinoa HOM04D006474 ORTHO04D007696 2.8e-20 102.4 143 40.6
Achn332091 Actinidia chinensis HOM04D006474 ORTHO04D007696 2.6e-18 95.9 106 48.1
Pp3c8_19270 Physcomitrium patens HOM04D006474 ORTHO04D007696 2.1e-15 86.3 274 23.7
Glyma.05G087800 Glycine max HOM04D006474 ORTHO04D007696 1.2e-10 70.5 71 47.9
Glyma.01G092700 Glycine max HOM04D006474 ORTHO04D007696 1.5e-10 70.1 71 45.1
PAB00013481 Picea abies HOM04D006474 ORTHO04D007696 3.4e-10 68.9 56 57.1
GSVIVG01015103001 Vitis vinifera HOM04D003251 ORTHO04D004010 1.2e-07 60.5 225 22.7
Gorai.001G015100 Gossypium raimondii HOM04D003251 ORTHO04D004010 1.6e-07 60.1 209 25.4
Ca_03155.g Cicer arietinum HOM04D003251 ORTHO04D004010 1.6e-07 60.1 224 24.6
C.cajan_04038.g Cajanus cajan HOM04D003251 ORTHO04D004010 4.7e-07 58.5 223 24.7
Gorai.009G034900 Gossypium raimondii HOM04D003251 ORTHO04D004010 1.8e-06 56.6 216 24.1
PAB00010535 Picea abies HOM04D003251 ORTHO04D004010 2.3e-06 56.2 219 22.4
DCAR_000225 Daucus carota HOM04D003251 ORTHO04D004010 5.1e-06 55.1 220 26.8
TCA.TCM_037560 Theobroma cacao HOM04D003251 ORTHO04D004010 6.7e-06 54.7 223 22.0
AT2G31670 Arabidopsis thaliana HOM04D003251 ORTHO04D004010 8.8e-06 54.3 218 22.9

Actinidia chinensis (2 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis ipaensis (0 genes)
Beta vulgaris (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Cajanus cajan (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Carica papaya (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (2 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (4 genes)
Gossypium raimondii (3 genes)
Hevea brasiliensis (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (3 genes)
Picea abies (3 genes)
Populus trichocarpa (2 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (1 genes)
Ricinus communis (0 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)
Ziziphus jujuba (1 genes)

Program Settings