Interactive Phylogenetics Module

Gene Id
Zm00001d045193

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d045193 Zea mays HOM04D004108 ORTHO04D005285 1.6e-166 588.6 353 100.0
LOC_Os06g07160 Oryza sativa ssp. japonica HOM04D004108 ORTHO04D005285 6.2e-123 443.7 337 82.5
Cc06_g22600 Coffea canephora HOM04D004108 ORTHO04D005285 2.9e-80 302.0 319 64.6
GSVIVG01010902001 Vitis vinifera HOM04D004108 ORTHO04D005285 2.5e-79 298.9 319 52.4
ATR0626G278 Amborella trichopoda HOM04D004108 ORTHO04D005285 1.0e-77 293.5 330 62.4
Solyc07g009320.2 Solanum lycopersicum HOM04D004108 ORTHO04D005285 8.8e-77 290.4 319 54.9
PGSC0003DMG400008514 Solanum tuberosum HOM04D004108 ORTHO04D005285 1.3e-75 286.6 319 62.7
HBR3021G004 Hevea brasiliensis HOM04D004108 ORTHO04D005285 1.4e-74 283.1 319 58.0
Peaxi162Scf00324g00718 Petunia axillaris HOM04D004108 ORTHO04D005285 5.4e-74 281.2 319 53.6
TCA.TCM_039342 Theobroma cacao HOM04D004108 ORTHO04D005285 1.2e-73 280.0 329 46.8
CAN.G1668.9 Capsicum annuum HOM04D004108 ORTHO04D005285 1.0e-72 276.9 319 52.4
Eucgr.C00132 Eucalyptus grandis HOM04D004108 ORTHO04D005285 1.7e-72 276.2 319 51.7
Manes.04G060300 Manihot esculenta HOM04D004108 ORTHO04D005285 3.8e-72 275.0 319 57.4
ZJU.LOC107421027 Ziziphus jujuba HOM04D004108 ORTHO04D005285 5.0e-72 274.6 313 58.5
Cpa.g.sc95.29 Carica papaya HOM04D004108 ORTHO04D005285 4.7e-70 268.1 319 49.5
MELO3C017439 Cucumis melo HOM04D004108 ORTHO04D005285 6.1e-70 267.7 323 58.5
Prupe.1G079200 Prunus persica HOM04D004108 ORTHO04D005285 1.0e-69 266.9 315 48.9
Cla018847.g Citrullus lanatus HOM04D004108 ORTHO04D005285 3.0e-69 265.4 320 56.6
Ciclev10008916m.g Citrus clementina HOM04D004108 ORTHO04D005285 4.0e-69 265.0 318 50.6
Gorai.004G025600 Gossypium raimondii HOM04D004108 ORTHO04D005285 4.0e-69 265.0 324 51.2
Bv8_198200_ajgc Beta vulgaris HOM04D004108 ORTHO04D005285 2.0e-68 262.7 334 50.6
Cucsa.081250 Cucumis sativus L. HOM04D004108 ORTHO04D005285 1.8e-66 256.1 323 51.1
Migut.L01897 Erythranthe guttata HOM04D004108 ORTHO04D005285 3.1e-66 255.4 319 58.9
NNU_15073 Nelumbo nucifera HOM04D004108 ORTHO04D005285 4.1e-66 255.0 203 60.6
AH014427 Amaranthus hypochondriacus HOM04D004108 ORTHO04D005285 1.2e-65 253.4 322 48.1
Glyma.15G164000 Glycine max HOM04D004108 ORTHO04D005285 1.2e-65 253.4 321 49.2
THA.LOC104819968 Tarenaya hassleriana HOM04D004108 ORTHO04D005285 1.6e-65 253.1 312 54.2
Tp3g32480 Schrenkiella parvula HOM04D004108 ORTHO04D005285 2.7e-65 252.3 311 50.8
Bo9g027530 Brassica oleracea HOM04D004108 ORTHO04D005285 3.5e-65 251.9 311 48.6
Glyma.09G057900 Glycine max HOM04D004108 ORTHO04D005285 5.9e-65 251.1 324 50.3
AUR62033246 Chenopodium quinoa HOM04D004108 ORTHO04D005285 7.8e-65 250.8 326 42.3
C.cajan_16440.g Cajanus cajan HOM04D004108 ORTHO04D005285 2.9e-64 248.8 237 51.5
Araip.UJ65V Arachis ipaensis HOM04D004108 ORTHO04D005285 5.0e-64 248.1 319 54.9
Potri.006G077100 Populus trichocarpa HOM04D004108 ORTHO04D005285 6.6e-64 247.7 327 57.5
Glyma.13G099400 Glycine max HOM04D004108 ORTHO04D005285 1.1e-63 246.9 321 52.6
Carubv10013910m.g Capsella rubella HOM04D004108 ORTHO04D005285 1.9e-63 246.1 311 48.6
AT2G19080 Arabidopsis thaliana HOM04D004108 ORTHO04D005285 3.3e-63 245.4 311 51.1
UGI.Scf00278.13173 Utricularia gibba HOM04D004108 ORTHO04D005285 2.1e-62 242.7 317 41.6
Pbr038795.2.g Pyrus bretschneideri HOM04D004108 ORTHO04D005285 2.1e-62 242.7 327 41.3
FVE17055 Fragaria vesca HOM04D004108 ORTHO04D005285 2.8e-62 242.3 321 43.0
C.cajan_03692.g Cajanus cajan HOM04D004108 ORTHO04D005285 8.0e-62 240.7 315 50.8
Brara.G00147 Brassica rapa HOM04D004108 ORTHO04D005285 8.0e-62 240.7 230 50.9
Bo7g002090 Brassica oleracea HOM04D004108 ORTHO04D005285 1.8e-61 239.6 230 50.9
Brara.I01108 Brassica rapa HOM04D004108 ORTHO04D005285 1.8e-61 239.6 230 50.9
Glyma.17G060700 Glycine max HOM04D004108 ORTHO04D005285 1.8e-61 239.6 327 52.0
TPR.G5388 Trifolium pratense HOM04D004108 ORTHO04D005285 3.0e-61 238.8 318 49.7
AL3G52840 Arabidopsis lyrata HOM04D004108 ORTHO04D005285 5.2e-61 238.0 230 51.3
Medtr2g036910 Medicago truncatula HOM04D004108 ORTHO04D005285 8.9e-61 237.3 230 50.4
Vradi07g22470 Vigna radiata var. radiata HOM04D004108 ORTHO04D005285 8.9e-61 237.3 347 46.1
Ca_08865.g Cicer arietinum HOM04D004108 ORTHO04D005285 3.4e-60 235.3 236 49.6
Vradi0264s00060 Vigna radiata var. radiata HOM04D004108 ORTHO04D005285 9.8e-60 233.8 334 44.6
TPR.G9028 Trifolium pratense HOM04D004108 ORTHO04D005285 8.3e-59 230.7 237 48.9
Potri.T161600 Populus trichocarpa HOM04D004108 ORTHO04D005285 1.4e-58 229.9 239 49.4
Medtr4g127630 Medicago truncatula HOM04D004108 ORTHO04D005285 4.1e-58 228.4 314 43.0
Pbr024817.1.g Pyrus bretschneideri HOM04D004108 ORTHO04D005285 7.0e-58 227.6 202 55.4
COL.COLO4_29315 Corchorus olitorius HOM04D004108 ORTHO04D005285 2.3e-56 222.6 277 52.0
RCO.g.29462.000013 Ricinus communis HOM04D004108 ORTHO04D005285 2.5e-55 219.2 202 53.0
Mapoly0001s0301 Marchantia polymorpha HOM04D004108 ORTHO04D005285 1.0e-53 213.8 316 44.0
Pp3c12_12510 Physcomitrium patens HOM04D004108 ORTHO04D005285 4.4e-52 208.4 249 43.8
Achn018371 Actinidia chinensis HOM04D004229 ORTHO04D004771 1.3e-51 206.8 278 47.5
Araip.J0LMG Arachis ipaensis HOM04D004108 ORTHO04D005285 2.9e-51 205.7 352 47.4
Ca_03229.g Cicer arietinum HOM04D004432 ORTHO04D005797 3.7e-51 205.3 225 48.0
Pp3c4_10660 Physcomitrium patens HOM04D004108 ORTHO04D005285 1.4e-50 203.4 318 38.7
AUR62021331 Chenopodium quinoa HOM04D004108 ORTHO04D005285 1.6e-49 199.9 327 37.0
DCAR_019823 Daucus carota HOM04D004432 ORTHO04D005797 1.1e-45 187.2 327 38.2
SMO358G0154 Selaginella moellendorffii HOM04D004108 ORTHO04D005285 4.6e-41 171.8 233 42.1
PAB00033809 Picea abies HOM04D004108 ORTHO04D005285 4.1e-34 148.7 139 51.1
CAN.G609.4 Capsicum annuum HOM04D004108 ORTHO04D005285 4.3e-31 138.7 135 51.9
Manes.14G161400 Manihot esculenta HOM04D004108 ORTHO04D005285 5.8e-28 128.3 112 56.2
CAN.G497.61 Capsicum annuum HOM04D004108 ORTHO04D005285 2.9e-27 125.9 118 52.5
Potri.T094701 Populus trichocarpa HOM04D004108 ORTHO04D005285 5.4e-26 121.7 112 57.1
Achn347301 Actinidia chinensis HOM04D004108 ORTHO04D005285 6.0e-25 118.2 276 39.9
SMO367G0296 Selaginella moellendorffii HOM04D004108 ORTHO04D005285 3.4e-20 102.4 248 31.5
MDO.mRNA.g.1994.2 Malus domestica HOM04D004108 ORTHO04D005285 9.9e-20 100.9 233 42.9
MDO.mRNA.g.7414.5 Malus domestica HOM04D004108 ORTHO04D005285 2.1e-17 93.2 178 49.4
CAN.G266.1 Capsicum annuum HOM04D004108 ORTHO04D005285 6.2e-14 81.6 158 36.1
Cre03.g177900 Chlamydomonas reinhardtii HOM04D004108 ORTHO04D005285 3.2e-10 69.3 201 26.9
Potri.018G147701 Populus trichocarpa HOM04D004108 ORTHO04D005285 5.5e-10 68.6 64 54.7
MDO.mRNA.g.1994.1 Malus domestica HOM04D004108 ORTHO04D005285 8.7e-08 61.2 42 59.5

Actinidia chinensis (2 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (2 genes)
Beta vulgaris (1 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Cajanus cajan (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (4 genes)
Carica papaya (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (4 genes)
Gossypium raimondii (1 genes)
Hevea brasiliensis (1 genes)
Malus domestica (3 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (4 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (2 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (2 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)
Ziziphus jujuba (1 genes)

Program Settings