Interactive Phylogenetics Module

Gene Id
Zm00001d028631

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d028631 Zea mays HOM04D007051 ORTHO04D009177 8.9e-174 612.5 309 100.0
LOC_Os03g16870 Oryza sativa ssp. japonica HOM04D007051 ORTHO04D009177 6.7e-121 436.8 309 70.9
TCA.TCM_042786 Theobroma cacao HOM04D007051 ORTHO04D009177 2.4e-86 322.0 305 52.5
GSVIVG01016535001 Vitis vinifera HOM04D007051 ORTHO04D009177 4.1e-86 321.2 304 52.6
Achn007321 Actinidia chinensis HOM04D007051 ORTHO04D009177 9.4e-83 310.1 305 51.8
AUR62038352 Chenopodium quinoa HOM04D007051 ORTHO04D009177 6.1e-82 307.4 304 50.7
ZJU.LOC107413528 Ziziphus jujuba HOM04D007051 ORTHO04D009177 2.3e-81 305.4 306 50.3
Ciclev10032197m.g Citrus clementina HOM04D007051 ORTHO04D009177 6.8e-81 303.9 301 50.5
Potri.010G205900 Populus trichocarpa HOM04D007051 ORTHO04D009177 1.2e-80 303.1 302 50.3
Gorai.011G257200 Gossypium raimondii HOM04D007051 ORTHO04D009177 1.7e-79 299.3 307 48.9
DCAR_027635 Daucus carota HOM04D007051 ORTHO04D009177 1.7e-79 299.3 305 49.2
Ca_21027.g Cicer arietinum HOM04D007051 ORTHO04D009177 4.8e-79 297.7 303 50.2
Cc02_g07990 Coffea canephora HOM04D007051 ORTHO04D009177 4.8e-79 297.7 302 50.0
Manes.07G114900 Manihot esculenta HOM04D007051 ORTHO04D009177 2.4e-78 295.4 302 48.7
Prupe.2G233400 Prunus persica HOM04D007051 ORTHO04D009177 7.7e-77 290.4 302 48.3
Migut.F01500 Erythranthe guttata HOM04D007051 ORTHO04D009177 2.9e-76 288.5 303 47.5
Pbr032360.1.g Pyrus bretschneideri HOM04D007051 ORTHO04D009177 3.8e-76 288.1 308 47.4
Glyma.18G289500 Glycine max HOM04D007051 ORTHO04D009177 1.1e-75 286.6 302 47.7
Cucsa.010670 Cucumis sativus L. HOM04D007051 ORTHO04D009177 1.5e-75 286.2 305 49.5
FVE26633 Fragaria vesca HOM04D007051 ORTHO04D009177 2.5e-75 285.4 305 48.9
Medtr7g024560 Medicago truncatula HOM04D007051 ORTHO04D009177 3.2e-75 285.0 303 47.9
MELO3C021650 Cucumis melo HOM04D007051 ORTHO04D009177 5.5e-75 284.3 305 49.5
AH023452 Amaranthus hypochondriacus HOM04D007051 ORTHO04D009177 1.6e-74 282.7 301 46.2
Cla004678.g Citrullus lanatus HOM04D007051 ORTHO04D009177 2.1e-74 282.3 305 47.9
C.cajan_25875.g Cajanus cajan HOM04D007051 ORTHO04D009177 2.1e-74 282.3 303 48.5
COL.COLO4_14997 Corchorus olitorius HOM04D007051 ORTHO04D009177 4.7e-74 281.2 338 46.7
Vradi04g10740 Vigna radiata var. radiata HOM04D007051 ORTHO04D009177 1.0e-73 280.0 302 48.0
ATR0559G284 Amborella trichopoda HOM04D007051 ORTHO04D009177 7.5e-72 273.9 294 48.6
Peaxi162Scf00658g00728 Petunia axillaris HOM04D007051 ORTHO04D009177 2.8e-71 271.9 302 47.4
TPR.G15525 Trifolium pratense HOM04D007051 ORTHO04D009177 1.1e-70 270.0 303 46.2
THA.LOC104799346 Tarenaya hassleriana HOM04D007051 ORTHO04D009177 1.2e-64 250.0 304 43.4
RCO.g.29887.000005 Ricinus communis HOM04D007051 ORTHO04D009177 2.6e-64 248.8 247 48.6
Eucgr.J00020 Eucalyptus grandis HOM04D007051 ORTHO04D009177 2.6e-64 248.8 234 51.7
Tp3g03000 Schrenkiella parvula HOM04D007051 ORTHO04D009177 1.4e-62 243.0 287 44.3
Bo5g148450 Brassica oleracea HOM04D007051 ORTHO04D009177 1.2e-61 240.0 287 43.9
Brara.E03472 Brassica rapa HOM04D007051 ORTHO04D009177 3.5e-61 238.4 287 43.2
UGI.Scf00066.6132 Utricularia gibba HOM04D007051 ORTHO04D009177 1.1e-59 233.4 300 41.3
Carubv10014253m.g Capsella rubella HOM04D007051 ORTHO04D009177 1.5e-59 233.0 287 42.2
AL3G13930 Arabidopsis lyrata HOM04D007051 ORTHO04D009177 8.0e-58 227.3 287 41.8
Cpa.g.sc1.397 Carica papaya HOM04D007051 ORTHO04D009177 1.7e-55 219.5 243 51.4
Bv2_037580_kgso Beta vulgaris HOM04D007051 ORTHO04D009177 4.6e-53 211.5 239 46.0
Zm00001d048259 Zea mays HOM04D007051 ORTHO04D009177 2.1e-45 186.0 97 95.9
Solyc06g043070.2 Solanum lycopersicum HOM04D007051 ORTHO04D009177 4.6e-45 184.9 240 44.2
MDO.mRNA.g.130.30 Malus domestica HOM04D007051 ORTHO04D009177 1.4e-41 173.3 238 41.6
AT3G04020 Arabidopsis thaliana HOM04D007051 ORTHO04D009177 1.5e-40 169.9 230 41.3
Pp3c12_11030 Physcomitrium patens HOM04D007051 ORTHO04D009177 1.3e-39 166.8 302 32.1
Ca_21025.g Cicer arietinum HOM04D007051 ORTHO04D009177 9.9e-32 140.6 131 51.9
AUR62041862 Chenopodium quinoa HOM04D007051 ORTHO04D009177 2.3e-28 129.4 111 55.9
Glyma.02G092900 Glycine max HOM04D007051 ORTHO04D009177 4.3e-27 125.2 238 34.0
Mapoly0002s0030 Marchantia polymorpha HOM04D007051 ORTHO04D009177 4.3e-27 125.2 274 25.9
AUR62041861 Chenopodium quinoa HOM04D007051 ORTHO04D009177 2.4e-22 109.4 112 47.3
C.cajan_08197.g Cajanus cajan HOM04D007051 ORTHO04D009177 1.8e-17 93.2 120 37.5
CAN.G1401.1 Capsicum annuum HOM04D007051 ORTHO04D009177 5.8e-16 88.2 63 58.7
Solyc06g043060.1 Solanum lycopersicum HOM04D007051 ORTHO04D009177 7.6e-16 87.8 63 58.7
Achn037341 Actinidia chinensis HOM04D007051 ORTHO04D032427 3.2e-06 55.8 72 44.4

Actinidia chinensis (2 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (0 genes)
Beta vulgaris (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Cajanus cajan (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Carica papaya (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (1 genes)
Hevea brasiliensis (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (1 genes)
Picea abies (0 genes)
Populus trichocarpa (1 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (1 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (0 genes)
Solanum lycopersicum (2 genes)
Solanum tuberosum (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)
Ziziphus jujuba (1 genes)

Program Settings