Interactive Phylogenetics Module

Gene Id
Zm00001d006500

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d006500 Zea mays HOM04D001315 ORTHO04D273986 1.1e-192 675.6 406 100.0
Zm00001d000314 Zea mays HOM04D001315 ORTHO04D002085 4.1e-62 241.9 140 97.9
Zm00001d010705 Zea mays HOM04D001315 ORTHO04D002085 1.8e-57 226.5 142 85.2
LOC_Os05g43490 Oryza sativa ssp. japonica HOM04D001315 ORTHO04D002085 1.7e-44 183.3 144 80.6
Zm00001d043324 Zea mays HOM04D001315 ORTHO04D002085 2.5e-27 126.3 117 63.2
NNU_05146 Nelumbo nucifera HOM04D001315 ORTHO04D002085 3.3e-27 125.9 103 61.2
LOC_Os01g56390 Oryza sativa ssp. japonica HOM04D001315 ORTHO04D002085 4.8e-26 122.1 121 68.6
MELO3C007122 Cucumis melo HOM04D001315 ORTHO04D002085 6.2e-26 121.7 109 58.7
Cucsa.047840 Cucumis sativus L. HOM04D001315 ORTHO04D002085 1.4e-25 120.6 109 57.8
Carubv10026571m.g Capsella rubella HOM04D001315 ORTHO04D002085 2.4e-25 119.8 109 56.0
COL.COLO4_31037 Corchorus olitorius HOM04D001315 ORTHO04D002085 2.4e-25 119.8 106 57.5
ZJU.LOC107412652 Ziziphus jujuba HOM04D001315 ORTHO04D002085 4.0e-25 119.0 108 63.9
AL8G12300 Arabidopsis lyrata HOM04D001315 ORTHO04D002085 5.3e-25 118.6 109 56.0
Zm00001d020516 Zea mays HOM04D000236 ORTHO04D002355 9.0e-25 117.9 81 80.2
Zm00001d012644 Zea mays HOM04D001315 ORTHO04D002085 9.0e-25 117.9 166 47.6
FVE30369 Fragaria vesca HOM04D001315 ORTHO04D002085 9.0e-25 117.9 108 70.4
Gorai.010G167400 Gossypium raimondii HOM04D001315 ORTHO04D002085 1.2e-24 117.5 106 67.9
Gorai.009G154000 Gossypium raimondii HOM04D001315 ORTHO04D002085 1.2e-24 117.5 103 58.3
Cla009784.g Citrullus lanatus HOM04D001315 ORTHO04D002085 1.5e-24 117.1 104 58.7
Ca_00483.g Cicer arietinum HOM04D001315 ORTHO04D002085 2.6e-24 116.3 108 54.6
Araip.D2LW3 Arachis ipaensis HOM04D001315 ORTHO04D002085 3.4e-24 115.9 108 63.0
Medtr2g019080 Medicago truncatula HOM04D001315 ORTHO04D002085 3.4e-24 115.9 116 52.6
GSVIVG01021526001 Vitis vinifera HOM04D001315 ORTHO04D002085 4.5e-24 115.5 129 49.6
Pbr039608.1.g Pyrus bretschneideri HOM04D001315 ORTHO04D002085 4.5e-24 115.5 104 70.2
Prupe.4G083400 Prunus persica HOM04D001315 ORTHO04D002085 7.6e-24 114.8 109 64.2
THA.LOC104798397 Tarenaya hassleriana HOM04D001315 ORTHO04D002085 7.6e-24 114.8 108 53.7
C.cajan_31955.g Cajanus cajan HOM04D001315 ORTHO04D002085 1.0e-23 114.4 120 60.0
Tp2g11030 Schrenkiella parvula HOM04D001315 ORTHO04D002085 1.3e-23 114.0 130 50.8
THA.LOC104812861 Tarenaya hassleriana HOM04D001315 ORTHO04D002085 1.7e-23 113.6 108 64.8
Achn090071 Actinidia chinensis HOM04D001315 ORTHO04D002085 1.7e-23 113.6 116 50.9
AUR62030153 Chenopodium quinoa HOM04D001315 ORTHO04D002085 1.7e-23 113.6 108 52.8
AT5G46170 Arabidopsis thaliana HOM04D001315 ORTHO04D002085 2.2e-23 113.2 101 57.4
TPR.G26263 Trifolium pratense HOM04D001315 ORTHO04D002085 3.8e-23 112.5 103 63.1
Glyma.13G219800 Glycine max HOM04D001315 ORTHO04D002085 4.9e-23 112.1 108 62.0
AH014701 Amaranthus hypochondriacus HOM04D001315 ORTHO04D002085 8.4e-23 111.3 109 58.7
TCA.TCM_029448 Theobroma cacao HOM04D001315 ORTHO04D002085 8.4e-23 111.3 103 66.0
Glyma.15G092600 Glycine max HOM04D001315 ORTHO04D002085 1.1e-22 110.9 103 64.1
Gorai.010G238100 Gossypium raimondii HOM04D001315 ORTHO04D002085 1.4e-22 110.5 106 65.1
Cpa.g.sc1683.1 Carica papaya HOM04D001315 ORTHO04D002085 3.2e-22 109.4 114 64.9
NNU_10037 Nelumbo nucifera HOM04D001315 ORTHO04D002085 3.2e-22 109.4 97 58.8
Bo7g074090 Brassica oleracea HOM04D001315 ORTHO04D002085 4.2e-22 109.0 135 45.2
Cucsa.111860 Cucumis sativus L. HOM04D001315 ORTHO04D002085 5.5e-22 108.6 108 62.0
MELO3C002753 Cucumis melo HOM04D001315 ORTHO04D002085 5.5e-22 108.6 108 62.0
RCO.g.29693.000010 Ricinus communis HOM04D001315 ORTHO04D002085 7.1e-22 108.2 106 67.9
Manes.17G072500 Manihot esculenta HOM04D001315 ORTHO04D002085 1.6e-21 107.1 103 67.0
Ciclev10015378m.g Citrus clementina HOM04D001315 ORTHO04D002085 1.6e-21 107.1 101 61.4
Bv8_188050_ttuw Beta vulgaris HOM04D001315 ORTHO04D002085 1.6e-21 107.1 111 55.0
Tp7g15660 Schrenkiella parvula HOM04D001315 ORTHO04D002085 2.1e-21 106.7 106 52.8
Cla019568.g Citrullus lanatus HOM04D001315 ORTHO04D002085 2.7e-21 106.3 101 65.3
Potri.011G082900 Populus trichocarpa HOM04D001315 ORTHO04D002085 3.5e-21 105.9 111 64.0
Gorai.011G045900 Gossypium raimondii HOM04D001315 ORTHO04D002085 4.6e-21 105.5 103 54.4
AL1G44100 Arabidopsis lyrata HOM04D001315 ORTHO04D002085 4.6e-21 105.5 112 58.0
Pp3c10_10820 Physcomitrium patens HOM04D001315 ORTHO04D002085 4.6e-21 105.5 103 50.5
Bo5g062570 Brassica oleracea HOM04D001315 ORTHO04D002085 4.6e-21 105.5 111 52.3
Eucgr.D00286 Eucalyptus grandis HOM04D001315 ORTHO04D002085 6.0e-21 105.1 115 52.2
Brara.F03638 Brassica rapa HOM04D001315 ORTHO04D002085 6.0e-21 105.1 110 49.1
CAN.G702.35 Capsicum annuum HOM04D001315 ORTHO04D002085 1.0e-20 104.4 102 64.7
Brara.I02836 Brassica rapa HOM04D001315 ORTHO04D002085 1.0e-20 104.4 112 51.8
Eucgr.D00284 Eucalyptus grandis HOM04D001315 ORTHO04D002085 1.0e-20 104.4 105 54.3
PGSC0003DMG400021165 Solanum tuberosum HOM04D001315 ORTHO04D002085 1.3e-20 104.0 114 50.0
Manes.15G123700 Manihot esculenta HOM04D001315 ORTHO04D002085 1.8e-20 103.6 103 67.0
HBR0006G012 Hevea brasiliensis HOM04D001315 ORTHO04D002085 3.9e-20 102.4 103 66.0
PAB00036762 Picea abies HOM04D001315 ORTHO04D002085 5.1e-20 102.1 105 49.5
THA.LOC104812677 Tarenaya hassleriana HOM04D001315 ORTHO04D002085 6.7e-20 101.7 110 50.0
AT4G18380 Arabidopsis thaliana HOM04D001315 ORTHO04D002085 1.5e-19 100.5 108 50.9
Mapoly0115s0056 Marchantia polymorpha HOM04D001315 ORTHO04D002085 1.9e-19 100.1 110 48.2
CAN.G187.10 Capsicum annuum HOM04D001315 ORTHO04D002085 1.9e-19 100.1 102 49.0
Potri.004G065900 Populus trichocarpa HOM04D001315 ORTHO04D002085 2.5e-19 99.8 110 62.7
AL7G35980 Arabidopsis lyrata HOM04D001315 ORTHO04D002085 2.5e-19 99.8 106 51.9
DCAR_027903 Daucus carota HOM04D001315 ORTHO04D002085 3.3e-19 99.4 109 60.6
DCAR_027902 Daucus carota HOM04D001315 ORTHO04D002085 3.3e-19 99.4 109 60.6
Migut.M00892 Erythranthe guttata HOM04D001315 ORTHO04D002085 5.7e-19 98.6 104 61.5
Bo2g129840 Brassica oleracea HOM04D001315 ORTHO04D002085 5.7e-19 98.6 108 63.9
Pp3c14_16580 Physcomitrium patens HOM04D001315 ORTHO04D002085 5.7e-19 98.6 101 49.5
ATR1098G127 Amborella trichopoda HOM04D001315 ORTHO04D002085 7.4e-19 98.2 103 47.6
UGI.Scf00044.4750 Utricularia gibba HOM04D001315 ORTHO04D002085 1.3e-18 97.4 105 45.7
Peaxi162Scf00465g00113 Petunia axillaris HOM04D001315 ORTHO04D002085 1.6e-18 97.1 110 57.3
Peaxi162Scf00317g00022 Petunia axillaris HOM04D001315 ORTHO04D002085 2.8e-18 96.3 102 56.9
AUR62002696 Chenopodium quinoa HOM04D001315 ORTHO04D002085 4.8e-18 95.5 97 49.5
THA.LOC104820656 Tarenaya hassleriana HOM04D001315 ORTHO04D002085 6.3e-18 95.1 119 57.1
Brara.B02876 Brassica rapa HOM04D001315 ORTHO04D002085 1.1e-17 94.4 108 61.1
PAB00057644 Picea abies HOM04D001315 ORTHO04D002085 1.1e-17 94.4 126 42.9
Carubv10004910m.g Capsella rubella HOM04D001315 ORTHO04D002085 2.4e-17 93.2 101 50.5
Cc00_g24620 Coffea canephora HOM04D001315 ORTHO04D002085 3.1e-17 92.8 103 59.2
Migut.H01354 Erythranthe guttata HOM04D001315 ORTHO04D002085 3.1e-17 92.8 116 56.9
PAB00065501 Picea abies HOM04D001315 ORTHO04D002085 6.9e-17 91.7 103 41.7
UGI.Scf00194.11139 Utricularia gibba HOM04D001315 ORTHO04D002085 2.0e-16 90.1 120 43.3
UGI.Scf00054.5388 Utricularia gibba HOM04D001315 ORTHO04D002085 2.6e-16 89.7 104 45.2
Brara.A00953 Brassica rapa HOM04D001315 ORTHO04D002085 2.6e-16 89.7 102 48.0
Bo1g019510 Brassica oleracea HOM04D001315 ORTHO04D002085 3.4e-16 89.4 106 47.2
SMO118G0548 Selaginella moellendorffii HOM04D001315 ORTHO04D002085 1.3e-15 87.4 112 44.6
SMO205G0014 Selaginella moellendorffii HOM04D001315 ORTHO04D002085 1.3e-15 87.4 102 42.2
ATR0787G224 Amborella trichopoda HOM04D001315 ORTHO04D002085 2.2e-15 86.7 103 37.9
Solyc08g048430.2 Solanum lycopersicum HOM04D001315 ORTHO04D002085 2.9e-15 86.3 102 59.8
THA.LOC104798466 Tarenaya hassleriana HOM04D001315 ORTHO04D002085 3.8e-15 85.9 117 44.4
PGSC0003DMG400019053 Solanum tuberosum HOM04D001315 ORTHO04D002085 5.0e-15 85.5 103 59.2
AT1G30200 Arabidopsis thaliana HOM04D001315 ORTHO04D002085 6.5e-15 85.1 116 42.2
CAN.G103.2 Capsicum annuum HOM04D001315 ORTHO04D002085 8.5e-15 84.7 102 57.8
Zm00001d047573 Zea mays HOM04D001315 ORTHO04D002085 1.1e-14 84.3 103 42.7
SMO358G0016 Selaginella moellendorffii HOM04D001315 ORTHO04D002085 1.1e-14 84.3 103 42.7
SMO142G0063 Selaginella moellendorffii HOM04D001315 ORTHO04D002085 1.1e-14 84.3 103 42.7
Tp1g26020 Schrenkiella parvula HOM04D001315 ORTHO04D002085 2.5e-14 83.2 55 67.3
ATR0307G014 Amborella trichopoda HOM04D001315 ORTHO04D002085 4.2e-14 82.4 98 42.9
NNU_11745 Nelumbo nucifera HOM04D001315 ORTHO04D002085 7.2e-14 81.6 89 52.8
Zm00001d028957 Zea mays HOM04D001315 ORTHO04D002085 1.2e-13 80.9 99 41.4
LOC_Os03g20500 Oryza sativa ssp. japonica HOM04D001315 ORTHO04D002085 1.2e-13 80.9 97 42.3
Carubv10009099m.g Capsella rubella HOM04D001315 ORTHO04D002085 1.6e-13 80.5 52 69.2
Medtr4g029330 Medicago truncatula HOM04D001315 ORTHO04D002085 3.6e-13 79.3 84 50.0
Achn374501 Actinidia chinensis HOM04D001315 ORTHO04D002085 1.8e-12 77.0 54 64.8
LOC_Os05g41130 Oryza sativa ssp. japonica HOM04D001315 ORTHO04D002085 5.1e-12 75.5 97 40.2
Cpa.g.sc36.117 Carica papaya HOM04D001315 ORTHO04D009644 3.3e-11 72.8 55 60.0
LOC_Os01g59690 Oryza sativa ssp. japonica HOM04D001315 ORTHO04D002085 1.3e-10 70.9 97 37.1
Cla022088.g Citrullus lanatus HOM04D001315 ORTHO04D009644 1.7e-10 70.5 56 57.1
Potri.005G166500 Populus trichocarpa HOM04D001315 ORTHO04D009644 2.8e-10 69.7 55 58.2
COL.COLO4_16430 Corchorus olitorius HOM04D001315 ORTHO04D009644 8.2e-10 68.2 55 56.4
Solyc02g070480.2 Solanum lycopersicum HOM04D001315 ORTHO04D002085 8.2e-10 68.2 39 76.9
ZJU.LOC107420861 Ziziphus jujuba HOM04D001315 ORTHO04D009644 1.8e-09 67.0 55 54.5
Gorai.010G042500 Gossypium raimondii HOM04D001315 ORTHO04D009644 1.8e-09 67.0 55 54.5
HBR1601G025 Hevea brasiliensis HOM04D001315 ORTHO04D009644 1.8e-09 67.0 55 58.2
NNU_14148 Nelumbo nucifera HOM04D001315 ORTHO04D002085 1.8e-09 67.0 60 56.7
Achn266611 Actinidia chinensis HOM04D001315 ORTHO04D009644 3.1e-09 66.2 54 53.7
Zm00001d038537 Zea mays HOM04D001315 ORTHO04D002085 6.9e-09 65.1 93 37.6
CAN.G1261.6 Capsicum annuum HOM04D001315 ORTHO04D009644 9.1e-09 64.7 52 57.7
Cucsa.154470 Cucumis sativus L. HOM04D001315 ORTHO04D009644 9.1e-09 64.7 55 52.7
MELO3C011360 Cucumis melo HOM04D001315 ORTHO04D009644 1.2e-08 64.3 52 57.7
Peaxi162Scf00041g00091 Petunia axillaris HOM04D001315 ORTHO04D009644 1.5e-08 63.9 52 57.7
NNU_09566 Nelumbo nucifera HOM04D001315 ORTHO04D002085 2.0e-08 63.5 104 28.8
PGSC0003DMG400009478 Solanum tuberosum HOM04D001315 ORTHO04D009644 2.0e-08 63.5 52 57.7
Migut.C00013 Erythranthe guttata HOM04D001315 ORTHO04D009644 2.0e-08 63.5 57 54.4
Potri.002G094600 Populus trichocarpa HOM04D001315 ORTHO04D009644 2.0e-08 63.5 53 54.7
Solyc04g072930.1 Solanum lycopersicum HOM04D001315 ORTHO04D009644 2.0e-08 63.5 52 57.7
RCO.g.29908.000061 Ricinus communis HOM04D001315 ORTHO04D009644 2.6e-08 63.2 55 52.7
TCA.TCM_040847 Theobroma cacao HOM04D001315 ORTHO04D002085 3.4e-08 62.8 48 56.2
Prupe.1G514000 Prunus persica HOM04D001315 ORTHO04D009644 4.5e-08 62.4 55 54.5
Zm00001d010640 Zea mays HOM04D001315 ORTHO04D002085 5.9e-08 62.0 93 36.6
NNU_10556 Nelumbo nucifera HOM04D001315 ORTHO04D002085 5.9e-08 62.0 96 29.2
TCA.TCM_034933 Theobroma cacao HOM04D001315 ORTHO04D009644 5.9e-08 62.0 55 50.9
Pbr011151.1.g Pyrus bretschneideri HOM04D001315 ORTHO04D009644 1.0e-07 61.2 55 50.9
NNU_22464 Nelumbo nucifera HOM04D001315 ORTHO04D009644 1.3e-07 60.8 55 49.1
Zm00001d043125 Zea mays HOM04D001315 ORTHO04D002085 1.7e-07 60.5 102 34.3
Bo7g058300 Brassica oleracea HOM04D001315 ORTHO04D009644 1.7e-07 60.5 49 55.1
Cc10_g07400 Coffea canephora HOM04D001315 ORTHO04D009644 2.2e-07 60.1 52 53.8
THA.LOC104810852 Tarenaya hassleriana HOM04D001315 ORTHO04D009644 2.2e-07 60.1 49 57.1
Potri.009G047600 Populus trichocarpa HOM04D001315 ORTHO04D002085 3.8e-07 59.3 49 57.1
Ciclev10001889m.g Citrus clementina HOM04D001315 ORTHO04D009644 3.8e-07 59.3 55 54.5
Mapoly0142s0022 Marchantia polymorpha HOM04D001315 ORTHO04D002085 8.5e-07 58.2 98 36.7
Carubv10009775m.g Capsella rubella HOM04D001315 ORTHO04D009644 1.1e-06 57.8 54 46.3
COL.COLO4_07228 Corchorus olitorius HOM04D001315 ORTHO04D002085 1.1e-06 57.8 48 52.1
Bo5g037420 Brassica oleracea HOM04D001315 ORTHO04D009644 1.4e-06 57.4 51 49.0
Brara.H02248 Brassica rapa HOM04D001315 ORTHO04D009644 1.4e-06 57.4 55 45.5
HBR1526G008 Hevea brasiliensis HOM04D001315 ORTHO04D002085 1.9e-06 57.0 55 49.1
Brara.G01043 Brassica rapa HOM04D001315 ORTHO04D009644 2.5e-06 56.6 49 51.0
AT1G22220 Arabidopsis thaliana HOM04D001315 ORTHO04D009644 3.2e-06 56.2 54 46.3
Bo8g071360 Brassica oleracea HOM04D001315 ORTHO04D009644 4.2e-06 55.8 55 45.5
GSVIVG01037246001 Vitis vinifera HOM04D001315 ORTHO04D002085 4.2e-06 55.8 111 35.1
Brara.I03368 Brassica rapa HOM04D001315 ORTHO04D009644 5.5e-06 55.5 51 47.1
AL1G35670 Arabidopsis lyrata HOM04D001315 ORTHO04D009644 9.4e-06 54.7 49 46.9
Gorai.006G125400 Gossypium raimondii HOM04D001315 ORTHO04D002085 9.4e-06 54.7 46 50.0

Actinidia chinensis (3 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (3 genes)
Arabidopsis lyrata (4 genes)
Arabidopsis thaliana (4 genes)
Arachis ipaensis (1 genes)
Beta vulgaris (1 genes)
Brassica oleracea (7 genes)
Brassica rapa (7 genes)
Cajanus cajan (1 genes)
Capsella rubella (4 genes)
Capsicum annuum (4 genes)
Carica papaya (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (3 genes)
Citrus clementina (2 genes)
Coffea canephora (2 genes)
Corchorus olitorius (3 genes)
Cucumis melo (3 genes)
Cucumis sativus L. (3 genes)
Daucus carota (2 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (2 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (6 genes)
Hevea brasiliensis (3 genes)
Malus domestica (0 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (7 genes)
Oryza sativa ssp. japonica (5 genes)
Petunia axillaris (3 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Prunus persica (2 genes)
Pyrus bretschneideri (2 genes)
Ricinus communis (2 genes)
Schrenkiella parvula (3 genes)
Selaginella moellendorffii (4 genes)
Solanum lycopersicum (3 genes)
Solanum tuberosum (3 genes)
Tarenaya hassleriana (6 genes)
Theobroma cacao (3 genes)
Trifolium pratense (1 genes)
Utricularia gibba (3 genes)
Vigna radiata var. radiata (0 genes)
Vitis vinifera (2 genes)
Zea mays (11 genes)
Ziziphus jujuba (2 genes)

Program Settings