Interactive Phylogenetics Module

Gene Id
Zm00001d006118

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d006118 Zea mays HOM04D005535 ORTHO04D007022 2.0e-152 541.6 327 100.0
LOC_Os09g33930 Oryza sativa ssp. japonica HOM04D005535 ORTHO04D007022 9.9e-107 389.8 319 79.0
TCA.TCM_021507 Theobroma cacao HOM04D005535 ORTHO04D007022 2.6e-83 312.0 310 67.7
Gorai.009G302100 Gossypium raimondii HOM04D005535 ORTHO04D007022 7.6e-83 310.5 315 68.3
Araip.14VDU Arachis ipaensis HOM04D005535 ORTHO04D007022 7.6e-83 310.5 316 64.6
Ca_02680.g Cicer arietinum HOM04D005535 ORTHO04D007022 1.3e-82 309.7 316 64.2
Manes.04G041300 Manihot esculenta HOM04D005535 ORTHO04D007022 2.9e-82 308.5 314 64.6
Cla010850.g Citrullus lanatus HOM04D005535 ORTHO04D007022 2.9e-82 308.5 316 65.5
Glyma.15G030700 Glycine max HOM04D005535 ORTHO04D007022 5.5e-81 304.3 321 63.9
MELO3C017720 Cucumis melo HOM04D005535 ORTHO04D007022 9.3e-81 303.5 316 63.9
Peaxi162Scf00375g00059 Petunia axillaris HOM04D005535 ORTHO04D007022 1.2e-80 303.1 313 64.5
COL.COLO4_21665 Corchorus olitorius HOM04D005535 ORTHO04D007022 2.7e-80 302.0 315 67.0
Medtr2g098650 Medicago truncatula HOM04D005535 ORTHO04D007022 2.7e-80 302.0 316 64.6
Achn086421 Actinidia chinensis HOM04D005535 ORTHO04D007022 1.0e-79 300.1 313 63.9
THA.LOC104803670 Tarenaya hassleriana HOM04D005535 ORTHO04D007022 1.0e-79 300.1 314 66.2
Ciclev10021008m.g Citrus clementina HOM04D005535 ORTHO04D007022 1.0e-79 300.1 314 63.4
ZJU.LOC107421848 Ziziphus jujuba HOM04D005535 ORTHO04D007022 1.1e-78 296.6 313 65.5
Eucgr.A00077 Eucalyptus grandis HOM04D005535 ORTHO04D007022 3.3e-78 295.0 321 64.5
FVE21692 Fragaria vesca HOM04D005535 ORTHO04D007022 3.3e-78 295.0 306 66.3
Cucsa.094840 Cucumis sativus L. HOM04D005535 ORTHO04D007022 4.3e-78 294.7 312 63.5
Bo1g056660 Brassica oleracea HOM04D005535 ORTHO04D007022 9.7e-78 293.5 316 66.5
AL5G41280 Arabidopsis lyrata HOM04D005535 ORTHO04D007022 1.6e-77 292.7 312 65.7
Vradi0332s00020 Vigna radiata var. radiata HOM04D005535 ORTHO04D007022 1.8e-76 289.3 332 60.5
AT3G59380 Arabidopsis thaliana HOM04D005535 ORTHO04D007022 1.8e-76 289.3 312 64.7
Bv3_056900_ipjm Beta vulgaris HOM04D005535 ORTHO04D007022 5.3e-76 287.7 318 64.2
Cc08_g05980 Coffea canephora HOM04D005535 ORTHO04D007022 4.5e-75 284.6 309 63.1
Carubv10017596m.g Capsella rubella HOM04D005535 ORTHO04D007022 1.7e-74 282.7 312 65.1
Glyma.13G343600 Glycine max HOM04D005535 ORTHO04D007022 1.7e-74 282.7 343 52.8
ATR0743G276 Amborella trichopoda HOM04D005535 ORTHO04D007022 2.2e-74 282.3 311 65.6
Cc05_g13970 Coffea canephora HOM04D005535 ORTHO04D007022 4.2e-73 278.1 309 63.8
Cpa.g.sc41.30 Carica papaya HOM04D005535 ORTHO04D007022 2.3e-71 272.3 312 63.1
TPR.G18871 Trifolium pratense HOM04D005535 ORTHO04D007022 2.3e-71 272.3 316 61.1
AUR62015400 Chenopodium quinoa HOM04D005535 ORTHO04D007022 2.3e-71 272.3 318 62.3
Solyc06g073390.2 Solanum lycopersicum HOM04D005535 ORTHO04D007022 3.3e-70 268.5 310 60.0
AUR62002291 Chenopodium quinoa HOM04D005535 ORTHO04D007022 4.3e-70 268.1 318 61.6
PGSC0003DMG400027009 Solanum tuberosum HOM04D005535 ORTHO04D007022 8.2e-69 263.8 313 59.4
C.cajan_13445.g Cajanus cajan HOM04D005535 ORTHO04D007022 4.5e-67 258.1 292 63.4
UGI.Scf00644.18015 Utricularia gibba HOM04D005535 ORTHO04D007022 1.7e-66 256.1 323 59.4
AH019966 Amaranthus hypochondriacus HOM04D005535 ORTHO04D007022 6.5e-66 254.2 318 51.3
Prupe.1G191500 Prunus persica HOM04D005535 ORTHO04D007022 8.5e-66 253.8 313 60.7
Tp7g13790 Schrenkiella parvula HOM04D005535 ORTHO04D007022 1.1e-65 253.4 315 58.7
Achn013231 Actinidia chinensis HOM04D005535 ORTHO04D007022 3.2e-65 251.9 316 44.3
RCO.g.28011.000003 Ricinus communis HOM04D005535 ORTHO04D007022 9.4e-65 250.4 319 57.4
Potri.007G127500 Populus trichocarpa HOM04D005535 ORTHO04D007022 1.0e-63 246.9 321 57.6
Migut.G00958 Erythranthe guttata HOM04D005535 ORTHO04D007022 3.0e-63 245.4 314 59.6
MDO.mRNA.g.2604.24 Malus domestica HOM04D005535 ORTHO04D007022 5.1e-63 244.6 315 58.7
CAN.G65.180 Capsicum annuum HOM04D005535 ORTHO04D007022 6.7e-63 244.2 282 61.7
GSVIVG01010747001 Vitis vinifera HOM04D005535 ORTHO04D007022 1.1e-62 243.4 314 58.0
DCAR_003909 Daucus carota HOM04D005535 ORTHO04D007022 1.5e-62 243.0 314 51.6
Pbr037280.1.g Pyrus bretschneideri HOM04D005535 ORTHO04D007022 2.0e-62 242.7 313 58.8
Pbr002714.1.g Pyrus bretschneideri HOM04D005535 ORTHO04D007022 2.8e-61 238.8 313 58.5
Pp3c9_24240 Physcomitrium patens HOM04D005535 ORTHO04D007022 8.2e-61 237.3 308 57.8
HBR0306G019 Hevea brasiliensis HOM04D005535 ORTHO04D007022 1.4e-60 236.5 314 57.0
NNU_02731 Nelumbo nucifera HOM04D005535 ORTHO04D007022 1.0e-58 230.3 248 56.9
PAB00002621 Picea abies HOM04D005535 ORTHO04D007022 8.5e-50 200.7 163 60.1
Eucgr.A00272 Eucalyptus grandis HOM04D005535 ORTHO04D007022 1.1e-49 200.3 166 58.4
Eucgr.A00076 Eucalyptus grandis HOM04D005535 ORTHO04D007022 5.5e-49 198.0 167 56.9
SMO137G0277 Selaginella moellendorffii HOM04D005535 ORTHO04D007022 3.4e-46 188.7 313 50.8
Cc05_g03950 Coffea canephora HOM04D005535 ORTHO04D007022 2.2e-45 186.0 158 53.8
Mapoly0093s0047 Marchantia polymorpha HOM04D005535 ORTHO04D007022 2.9e-42 175.6 315 50.5
HBR3201G002 Hevea brasiliensis HOM04D005535 ORTHO04D007022 2.8e-32 142.5 175 74.3
Brara.A01981 Brassica rapa HOM04D005535 ORTHO04D007022 4.0e-31 138.7 139 50.4
Eucgr.L02278 Eucalyptus grandis HOM04D005535 ORTHO04D007022 9.2e-28 127.5 87 69.0
MCO13G170 Micromonas commoda HOM04D005535 ORTHO04D007022 1.6e-19 100.1 240 27.1
Cre01.g016950 Chlamydomonas reinhardtii HOM04D005535 ORTHO04D007022 1.1e-15 87.4 227 53.3
Cpa.g.sc41.23 Carica papaya HOM04D005535 ORTHO04D007022 1.6e-11 73.6 53 62.3
Cpa.g.sc41.24 Carica papaya HOM04D005535 ORTHO04D007022 9.5e-09 64.3 125 36.8
Achn373341 Actinidia chinensis HOM04D005535 ORTHO04D007022 1.2e-08 63.9 45 64.4

Actinidia chinensis (3 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (1 genes)
Beta vulgaris (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Cajanus cajan (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Carica papaya (3 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (3 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (4 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (1 genes)
Hevea brasiliensis (2 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (2 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)
Ziziphus jujuba (1 genes)

Program Settings