Interactive Phylogenetics Module

Gene Id
Zm00001d002366

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d002366 Zea mays HOM04D003212 ORTHO04D003840 4.3e-151 537.0 280 100.0
LOC_Os10g25770 Oryza sativa ssp. japonica HOM04D003212 ORTHO04D003840 7.1e-138 493.0 280 91.1
NNU_11857 Nelumbo nucifera HOM04D003212 ORTHO04D003840 1.4e-109 399.1 279 74.6
GSVIVG01019802001 Vitis vinifera HOM04D003212 ORTHO04D003840 3.1e-109 397.9 278 73.0
HBR3471G020 Hevea brasiliensis HOM04D003212 ORTHO04D003840 1.7e-107 392.1 286 71.3
ZJU.LOC107429959 Ziziphus jujuba HOM04D003212 ORTHO04D003840 5.0e-107 390.6 278 73.4
Cpa.g.sc87.99 Carica papaya HOM04D003212 ORTHO04D003840 9.4e-106 386.3 282 72.7
Cc08_g14280 Coffea canephora HOM04D003212 ORTHO04D003840 1.2e-105 386.0 276 71.7
Manes.02G024800 Manihot esculenta HOM04D003212 ORTHO04D003840 1.6e-105 385.6 286 71.0
UGI.Scf00051.5221 Utricularia gibba HOM04D003212 ORTHO04D003840 1.4e-104 382.5 282 70.2
UGI.Scf00059.5742 Utricularia gibba HOM04D003212 ORTHO04D003840 3.9e-104 380.9 282 69.1
Potri.001G107500 Populus trichocarpa HOM04D003212 ORTHO04D003840 3.9e-104 380.9 285 70.2
Cucsa.106900 Cucumis sativus L. HOM04D003212 ORTHO04D003840 5.1e-104 380.6 278 71.9
Migut.A00798 Erythranthe guttata HOM04D003212 ORTHO04D003840 1.5e-103 379.0 277 71.1
Vradi07g30280 Vigna radiata var. radiata HOM04D003212 ORTHO04D003840 2.0e-103 378.6 278 71.2
Manes.01G064600 Manihot esculenta HOM04D003212 ORTHO04D003840 2.6e-103 378.3 286 69.2
RCO.g.30190.000404 Ricinus communis HOM04D003212 ORTHO04D003840 2.6e-103 378.3 283 70.0
DCAR_006753 Daucus carota HOM04D003212 ORTHO04D003840 3.3e-103 377.9 278 71.6
Gorai.007G022800 Gossypium raimondii HOM04D003212 ORTHO04D003840 3.3e-103 377.9 280 67.9
HBR0306G041 Hevea brasiliensis HOM04D003212 ORTHO04D003840 5.7e-103 377.1 287 69.7
Peaxi162Scf00269g01517 Petunia axillaris HOM04D003212 ORTHO04D003840 8.2e-102 373.2 277 71.8
TCA.TCM_016212 Theobroma cacao HOM04D003212 ORTHO04D003840 1.4e-101 372.5 281 66.9
AUR62001667 Chenopodium quinoa HOM04D003212 ORTHO04D003840 1.8e-101 372.1 292 66.1
Gorai.004G209400 Gossypium raimondii HOM04D003212 ORTHO04D003840 2.4e-101 371.7 280 66.8
C.cajan_11507.g Cajanus cajan HOM04D003212 ORTHO04D003840 2.4e-101 371.7 279 71.0
Glyma.05G205200 Glycine max HOM04D003212 ORTHO04D003840 2.4e-101 371.7 279 69.2
CAN.G308.26 Capsicum annuum HOM04D003212 ORTHO04D003840 2.4e-101 371.7 272 70.6
Araip.8IH70 Arachis ipaensis HOM04D003212 ORTHO04D003840 2.4e-101 371.7 277 69.3
PGSC0003DMG400005187 Solanum tuberosum HOM04D003212 ORTHO04D003840 4.1e-101 370.9 273 71.4
Glyma.08G012100 Glycine max HOM04D003212 ORTHO04D003840 5.3e-101 370.5 279 67.4
COL.COLO4_18522 Corchorus olitorius HOM04D003212 ORTHO04D003840 1.2e-100 369.4 282 66.3
DCAR_000683 Daucus carota HOM04D003212 ORTHO04D003840 1.5e-100 369.0 278 70.1
Ciclev10021533m.g Citrus clementina HOM04D003212 ORTHO04D003840 1.5e-100 369.0 281 68.0
Achn380181 Actinidia chinensis HOM04D003212 ORTHO04D003840 2.6e-100 368.2 282 68.8
Achn332081 Actinidia chinensis HOM04D003212 ORTHO04D003840 3.5e-100 367.9 282 68.1
Medtr5g010620 Medicago truncatula HOM04D003212 ORTHO04D003840 4.5e-100 367.5 278 68.7
Tp6g06320 Schrenkiella parvula HOM04D003212 ORTHO04D003840 5.9e-100 367.1 279 67.7
Ca_02421.g Cicer arietinum HOM04D003212 ORTHO04D003840 5.9e-100 367.1 278 69.1
Migut.J01798 Erythranthe guttata HOM04D003212 ORTHO04D003840 1.0e-99 366.3 280 68.9
AUR62019502 Chenopodium quinoa HOM04D003212 ORTHO04D003840 1.7e-99 365.5 291 64.6
CAN.G100.2 Capsicum annuum HOM04D003212 ORTHO04D003840 2.2e-99 365.2 272 69.9
TPR.G6680 Trifolium pratense HOM04D003212 ORTHO04D003840 1.1e-98 362.8 277 67.9
MELO3C016344 Cucumis melo HOM04D003212 ORTHO04D003840 1.1e-98 362.8 309 66.0
FVE32427 Fragaria vesca HOM04D003212 ORTHO04D003840 1.4e-98 362.5 281 68.0
AUR62020113 Chenopodium quinoa HOM04D003212 ORTHO04D003840 1.9e-98 362.1 292 64.4
Medtr8g096950 Medicago truncatula HOM04D003212 ORTHO04D003840 3.2e-98 361.3 282 69.5
TPR.G12978 Trifolium pratense HOM04D003212 ORTHO04D003840 1.4e-96 355.9 281 68.0
Glyma.01G217900 Glycine max HOM04D003212 ORTHO04D003840 1.8e-96 355.5 232 75.9
Prupe.5G094900 Prunus persica HOM04D003212 ORTHO04D003840 2.3e-96 355.1 275 68.4
Glyma.11G025300 Glycine max HOM04D003212 ORTHO04D003840 1.1e-95 352.8 246 71.5
Eucgr.D01884 Eucalyptus grandis HOM04D003212 ORTHO04D003840 1.5e-95 352.4 278 66.2
THA.LOC104813037 Tarenaya hassleriana HOM04D003212 ORTHO04D003840 2.8e-94 348.2 278 65.1
C.cajan_13187.g Cajanus cajan HOM04D003212 ORTHO04D003840 1.8e-93 345.5 247 70.0
Solyc06g064890.2 Solanum lycopersicum HOM04D003212 ORTHO04D003840 2.4e-93 345.1 250 70.8
Brara.B02748 Brassica rapa HOM04D003212 ORTHO04D003840 5.3e-93 344.0 278 65.1
Bo2g109010 Brassica oleracea HOM04D003212 ORTHO04D003840 5.3e-93 344.0 278 65.1
AH002734 Amaranthus hypochondriacus HOM04D003212 ORTHO04D003840 7.0e-93 343.6 287 63.4
Araip.XRM4G Arachis ipaensis HOM04D003212 ORTHO04D003840 1.6e-92 342.4 278 66.5
Pbr011023.1.g Pyrus bretschneideri HOM04D003212 ORTHO04D003840 1.6e-92 342.4 281 65.8
Vradi11g02280 Vigna radiata var. radiata HOM04D003212 ORTHO04D003840 1.7e-91 339.0 227 74.4
Pbr018276.2.g Pyrus bretschneideri HOM04D003212 ORTHO04D003840 2.9e-91 338.2 278 65.5
ATR0706G062 Amborella trichopoda HOM04D003212 ORTHO04D003840 3.8e-91 337.8 291 64.9
THA.LOC104814932 Tarenaya hassleriana HOM04D003212 ORTHO04D003840 4.2e-90 334.3 278 63.7
Cla014643.g Citrullus lanatus HOM04D003212 ORTHO04D003840 7.2e-90 333.6 310 62.3
Carubv10005418m.g Capsella rubella HOM04D003212 ORTHO04D003840 1.2e-89 332.8 288 64.2
AL7G33560 Arabidopsis lyrata HOM04D003212 ORTHO04D003840 1.8e-88 328.9 283 62.5
AT4G20330 Arabidopsis thaliana HOM04D003212 ORTHO04D003840 6.8e-88 327.0 283 63.6
MDO.mRNA.g.408.2 Malus domestica HOM04D003212 ORTHO04D003840 3.4e-87 324.7 237 70.9
Bo1g020350 Brassica oleracea HOM04D003212 ORTHO04D003840 6.3e-86 320.5 287 60.6
Brara.A01026 Brassica rapa HOM04D003212 ORTHO04D003840 2.4e-85 318.5 287 61.0
Carubv10007807m.g Capsella rubella HOM04D003212 ORTHO04D003840 1.2e-79 299.7 283 58.3
Tp7g18680 Schrenkiella parvula HOM04D003212 ORTHO04D003840 9.1e-77 290.0 281 56.9
Eucgr.L03418 Eucalyptus grandis HOM04D003212 ORTHO04D003840 1.6e-76 289.3 277 57.8
FVE25317 Fragaria vesca HOM04D003212 ORTHO04D003840 2.5e-74 282.0 280 56.4
AUR62029439 Chenopodium quinoa HOM04D003212 ORTHO04D003840 7.2e-74 280.4 189 72.5
Pp3c12_26130 Physcomitrium patens HOM04D003212 ORTHO04D003840 9.5e-74 280.0 288 53.5
COL.COLO4_34423 Corchorus olitorius HOM04D003212 ORTHO04D003840 4.7e-73 277.7 237 61.6
AT4G21010 Arabidopsis thaliana HOM04D003212 ORTHO04D003840 8.9e-72 273.5 282 56.0
PAB00050576 Picea abies HOM04D003212 ORTHO04D003840 1.8e-69 265.8 189 70.9
Mapoly0033s0069 Marchantia polymorpha HOM04D003212 ORTHO04D003840 7.3e-66 253.8 285 49.5
MDO.mRNA.g.7356.1 Malus domestica HOM04D003212 ORTHO04D003840 5.4e-61 237.7 237 56.1
AL7G33140 Arabidopsis lyrata HOM04D003212 ORTHO04D003840 1.2e-60 236.5 282 51.8
SMO169G0005 Selaginella moellendorffii HOM04D003212 ORTHO04D003840 8.6e-59 230.3 227 50.2
NNU_25169 Nelumbo nucifera HOM04D003212 ORTHO04D003840 1.3e-54 216.5 169 68.0
Eucgr.J02343 Eucalyptus grandis HOM04D003212 ORTHO04D003840 1.1e-53 213.4 264 50.8
GSVIVG01019026001 Vitis vinifera HOM04D003212 ORTHO04D003840 4.6e-52 208.0 156 69.9
Bv7_172420_ncxh Beta vulgaris HOM04D003212 ORTHO04D003840 4.9e-46 188.0 130 72.3
NNU_25170 Nelumbo nucifera HOM04D003212 ORTHO04D003840 7.1e-45 184.1 115 78.3
Achn001831 Actinidia chinensis HOM04D003212 ORTHO04D003840 5.6e-34 147.9 150 56.0
AH002899 Amaranthus hypochondriacus HOM04D003212 ORTHO04D003840 6.4e-30 134.4 187 43.3
Potri.001G316100 Populus trichocarpa HOM04D003212 ORTHO04D003840 1.4e-21 106.7 94 60.6
MCO15G364 Micromonas commoda HOM04D003212 ORTHO04D003840 6.0e-20 101.3 214 33.2
Glyma.05G128600 Glycine max HOM04D003212 ORTHO04D003840 1.2e-15 87.0 59 74.6
MDO.mRNA.g.3684.12 Malus domestica HOM04D003212 ORTHO04D003840 4.2e-13 78.6 90 53.3
Medtr0411s0050 Medicago truncatula HOM04D003212 ORTHO04D003840 6.0e-12 74.7 56 62.5
Potri.003G123900 Populus trichocarpa HOM04D003212 ORTHO04D003840 1.3e-09 67.0 81 50.6
Medtr7g055620 Medicago truncatula HOM04D005884 ORTHO04D003840 4.1e-08 62.0 124 35.5
Medtr3g110015 Medicago truncatula HOM04D003212 ORTHO04D003840 6.9e-08 61.2 81 49.4
Medtr3g109978 Medicago truncatula HOM04D003212 ORTHO04D003840 6.9e-08 61.2 81 49.4
PAB00049175 Picea abies HOM04D003212 ORTHO04D003840 9.0e-08 60.8 95 45.3

Actinidia chinensis (3 genes)
Amaranthus hypochondriacus (2 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis ipaensis (2 genes)
Beta vulgaris (1 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Cajanus cajan (2 genes)
Capsella rubella (2 genes)
Capsicum annuum (2 genes)
Carica papaya (1 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (3 genes)
Fragaria vesca (2 genes)
Glycine max (5 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (2 genes)
Malus domestica (3 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (6 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (3 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (3 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (2 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (2 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Utricularia gibba (2 genes)
Vigna radiata var. radiata (2 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)
Ziziphus jujuba (1 genes)

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