Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Peaxi162Scf00658g00728	Petunia axillaris	HOM04D007051	ORTHO04D009177	8.4e-169	595.9	301	100.0
Achn007321	Actinidia chinensis	HOM04D007051	ORTHO04D009177	2.1e-119	431.8	306	70.9
Cc02_g07990	Coffea canephora	HOM04D007051	ORTHO04D009177	6.7e-118	426.8	305	70.2
GSVIVG01016535001	Vitis vinifera	HOM04D007051	ORTHO04D009177	1.1e-112	409.5	305	67.2
TCA.TCM_042786	Theobroma cacao	HOM04D007051	ORTHO04D009177	4.4e-109	397.5	302	65.2
DCAR_027635	Daucus carota	HOM04D007051	ORTHO04D009177	4.5e-106	387.5	305	63.0
Ciclev10032197m.g	Citrus clementina	HOM04D007051	ORTHO04D009177	1.9e-104	382.1	305	62.0
Gorai.011G257200	Gossypium raimondii	HOM04D007051	ORTHO04D009177	7.2e-104	380.2	302	61.6
Migut.F01500	Erythranthe guttata	HOM04D007051	ORTHO04D009177	1.2e-103	379.4	306	61.4
Glyma.18G289500	Glycine max	HOM04D007051	ORTHO04D009177	1.6e-103	379.0	305	62.0
ZJU.LOC107413528	Ziziphus jujuba	HOM04D007051	ORTHO04D009177	6.1e-103	377.1	305	61.0
Prupe.2G233400	Prunus persica	HOM04D007051	ORTHO04D009177	4.0e-102	374.4	305	61.3
Ca_21027.g	Cicer arietinum	HOM04D007051	ORTHO04D009177	6.8e-102	373.6	305	60.7
Potri.010G205900	Populus trichocarpa	HOM04D007051	ORTHO04D009177	4.4e-101	370.9	305	60.7
FVE26633	Fragaria vesca	HOM04D007051	ORTHO04D009177	1.3e-100	369.4	305	59.3
Manes.07G114900	Manihot esculenta	HOM04D007051	ORTHO04D009177	3.7e-100	367.9	305	60.7
C.cajan_25875.g	Cajanus cajan	HOM04D007051	ORTHO04D009177	4.8e-100	367.5	305	61.0
Medtr7g024560	Medicago truncatula	HOM04D007051	ORTHO04D009177	4.8e-100	367.5	305	59.0
Vradi04g10740	Vigna radiata var. radiata	HOM04D007051	ORTHO04D009177	6.3e-100	367.1	305	61.0
AUR62038352	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	1.1e-99	366.3	305	61.0
Pbr032360.1.g	Pyrus bretschneideri	HOM04D007051	ORTHO04D009177	1.5e-96	355.9	311	57.9
TPR.G15525	Trifolium pratense	HOM04D007051	ORTHO04D009177	3.2e-96	354.8	302	58.3
Solyc06g043070.2	Solanum lycopersicum	HOM04D007051	ORTHO04D009177	2.1e-95	352.1	236	78.4
AH023452	Amaranthus hypochondriacus	HOM04D007051	ORTHO04D009177	3.7e-92	341.3	306	55.6
COL.COLO4_14997	Corchorus olitorius	HOM04D007051	ORTHO04D009177	2.0e-90	335.5	346	53.5
Cla004678.g	Citrullus lanatus	HOM04D007051	ORTHO04D009177	4.3e-88	327.8	306	53.9
RCO.g.29887.000005	Ricinus communis	HOM04D007051	ORTHO04D009177	1.6e-87	325.9	254	63.0
ATR0559G284	Amborella trichopoda	HOM04D007051	ORTHO04D009177	4.0e-86	321.2	290	56.2
Cucsa.010670	Cucumis sativus L.	HOM04D007051	ORTHO04D009177	7.0e-83	310.5	306	52.0
MELO3C021650	Cucumis melo	HOM04D007051	ORTHO04D009177	9.2e-83	310.1	308	52.3
Brara.E03472	Brassica rapa	HOM04D007051	ORTHO04D009177	8.6e-81	303.5	304	49.3
Bo5g148450	Brassica oleracea	HOM04D007051	ORTHO04D009177	1.1e-80	303.1	304	49.7
THA.LOC104799346	Tarenaya hassleriana	HOM04D007051	ORTHO04D009177	1.5e-80	302.8	306	50.0
Eucgr.J00020	Eucalyptus grandis	HOM04D007051	ORTHO04D009177	3.3e-80	301.6	233	61.8
Tp3g03000	Schrenkiella parvula	HOM04D007051	ORTHO04D009177	4.3e-80	301.2	304	49.7
UGI.Scf00066.6132	Utricularia gibba	HOM04D007051	ORTHO04D009177	1.6e-79	299.3	302	54.0
AL3G13930	Arabidopsis lyrata	HOM04D007051	ORTHO04D009177	5.8e-77	290.8	303	47.5
Carubv10014253m.g	Capsella rubella	HOM04D007051	ORTHO04D009177	6.4e-76	287.3	304	46.7
LOC_Os03g16870	Oryza sativa ssp. japonica	HOM04D007051	ORTHO04D009177	2.3e-73	278.9	298	50.0
Zm00001d028631	Zea mays	HOM04D007051	ORTHO04D009177	4.7e-71	271.2	302	47.4
Bv2_037580_kgso	Beta vulgaris	HOM04D007051	ORTHO04D009177	3.5e-66	255.0	236	58.9
Cpa.g.sc1.397	Carica papaya	HOM04D007051	ORTHO04D009177	1.0e-65	253.4	239	56.9
AT3G04020	Arabidopsis thaliana	HOM04D007051	ORTHO04D009177	4.9e-52	208.0	238	46.2
MDO.mRNA.g.130.30	Malus domestica	HOM04D007051	ORTHO04D009177	1.9e-48	196.1	238	47.9
Glyma.02G092900	Glycine max	HOM04D007051	ORTHO04D009177	5.6e-48	194.5	225	48.9
Pp3c12_11030	Physcomitrium patens	HOM04D007051	ORTHO04D009177	8.4e-44	180.6	301	33.6
AUR62041862	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	2.4e-43	179.1	114	71.9
Ca_21025.g	Cicer arietinum	HOM04D007051	ORTHO04D009177	4.3e-32	141.7	129	54.3
Mapoly0002s0030	Marchantia polymorpha	HOM04D007051	ORTHO04D009177	2.8e-31	139.0	274	29.9
Solyc06g043060.1	Solanum lycopersicum	HOM04D007051	ORTHO04D009177	2.4e-30	136.0	68	92.6
CAN.G1401.1	Capsicum annuum	HOM04D007051	ORTHO04D009177	2.1e-26	122.9	69	85.5
AUR62041861	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	1.6e-23	113.2	113	54.0
Zm00001d048259	Zea mays	HOM04D007051	ORTHO04D009177	2.8e-23	112.5	124	48.4
C.cajan_08197.g	Cajanus cajan	HOM04D007051	ORTHO04D009177	7.2e-19	97.8	123	44.7
Achn037351	Actinidia chinensis	HOM04D007051	ORTHO04D009177	6.9e-14	81.3	67	64.2
Achn037341	Actinidia chinensis	HOM04D007051	ORTHO04D032427	1.1e-11	73.9	68	50.0
MDO.mRNA.g.706.21	Malus domestica	HOM04D007051	ORTHO04D009177	1.4e-06	57.0	57	50.9

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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