Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
LOC_Os03g02020	Oryza sativa ssp. japonica	HOM04D006474	ORTHO04D007696	7.2e-72	272.7	134	100.0
Zm00001d048515	Zea mays	HOM04D006474	ORTHO04D007696	3.4e-53	210.7	131	77.9
Cpa.g.sc39.21	Carica papaya	HOM04D006474	ORTHO04D007696	9.2e-35	149.4	127	56.7
Brara.C01653	Brassica rapa	HOM04D006474	ORTHO04D007696	4.6e-34	147.1	128	53.1
Carubv10023899m.g	Capsella rubella	HOM04D006474	ORTHO04D007696	4.6e-34	147.1	132	52.3
THA.LOC104800995	Tarenaya hassleriana	HOM04D006474	ORTHO04D007696	7.8e-34	146.4	128	53.1
Bo3g026700	Brassica oleracea	HOM04D006474	ORTHO04D007696	1.7e-33	145.2	128	53.1
Pbr011024.1.g	Pyrus bretschneideri	HOM04D006474	ORTHO04D007696	1.7e-33	145.2	131	54.2
Ciclev10016122m.g	Citrus clementina	HOM04D006474	ORTHO04D007696	3.9e-33	144.1	128	53.1
GSVIVG01019803001	Vitis vinifera	HOM04D006474	ORTHO04D007696	8.6e-33	142.9	128	55.5
AL4G27880	Arabidopsis lyrata	HOM04D006474	ORTHO04D007696	1.1e-32	142.5	128	52.3
Tp4g14850	Schrenkiella parvula	HOM04D006474	ORTHO04D007696	1.1e-32	142.5	128	51.6
MELO3C016345	Cucumis melo	HOM04D006474	ORTHO04D007696	1.5e-32	142.1	128	53.9
ZJU.LOC107429939	Ziziphus jujuba	HOM04D006474	ORTHO04D007696	1.9e-32	141.7	128	54.7
ATR0680G238	Amborella trichopoda	HOM04D006474	ORTHO04D007696	3.3e-32	141.0	133	51.1
Medtr8g096960	Medicago truncatula	HOM04D006474	ORTHO04D007696	9.6e-32	139.4	128	55.5
CAN.G26.17	Capsicum annuum	HOM04D006474	ORTHO04D007696	1.2e-31	139.0	131	51.1
Gorai.008G189400	Gossypium raimondii	HOM04D006474	ORTHO04D007696	2.1e-31	138.3	129	52.7
C.cajan_11508.g	Cajanus cajan	HOM04D006474	ORTHO04D007696	3.6e-31	137.5	128	53.1
COL.COLO4_11251	Corchorus olitorius	HOM04D006474	ORTHO04D007696	3.6e-31	137.5	128	52.3
Prupe.5G095100	Prunus persica	HOM04D006474	ORTHO04D007696	3.6e-31	137.5	128	53.9
Ca_05722.g	Cicer arietinum	HOM04D006474	ORTHO04D007696	1.1e-30	136.0	128	52.3
PGSC0003DMG400004251	Solanum tuberosum	HOM04D006474	ORTHO04D007696	1.1e-30	136.0	131	50.4
Glyma.08G012200	Glycine max	HOM04D006474	ORTHO04D007696	1.4e-30	135.6	128	53.1
Migut.A00797	Erythranthe guttata	HOM04D006474	ORTHO04D007696	1.8e-30	135.2	128	52.3
Potri.014G154900	Populus trichocarpa	HOM04D006474	ORTHO04D007696	2.4e-30	134.8	128	52.3
Eucgr.D01883	Eucalyptus grandis	HOM04D006474	ORTHO04D007696	3.1e-30	134.4	129	50.4
TPR.G12841	Trifolium pratense	HOM04D006474	ORTHO04D007696	4.0e-30	134.0	128	51.6
Cc08_g14300	Coffea canephora	HOM04D006474	ORTHO04D007696	4.0e-30	134.0	128	50.8
Solyc12g056350.1	Solanum lycopersicum	HOM04D006474	ORTHO04D007696	6.8e-30	133.3	128	50.0
Glyma.05G205300	Glycine max	HOM04D006474	ORTHO04D007696	3.4e-29	131.0	128	51.6
AH018659	Amaranthus hypochondriacus	HOM04D006474	ORTHO04D007696	9.9e-29	129.4	128	52.3
DCAR_008412	Daucus carota	HOM04D006474	ORTHO04D007696	9.3e-27	122.9	130	48.5
Bv5_100700_zcuq	Beta vulgaris	HOM04D006474	ORTHO04D007696	1.3e-25	119.0	128	52.3
MDO.mRNA.g.408.1	Malus domestica	HOM04D006474	ORTHO04D007696	6.6e-25	116.7	106	55.7
NNU_21048	Nelumbo nucifera	HOM04D006474	ORTHO04D007696	1.1e-24	115.9	103	55.3
Cucsa.106890	Cucumis sativus L.	HOM04D006474	ORTHO04D007696	3.3e-24	114.4	128	45.3
Peaxi162Scf01294g00327	Petunia axillaris	HOM04D006474	ORTHO04D007696	7.3e-24	113.2	133	42.9
PAB00044629	Picea abies	HOM04D006474	ORTHO04D007696	1.3e-23	112.5	131	44.3
Manes.12G073000	Manihot esculenta	HOM04D006474	ORTHO04D007696	1.4e-22	109.0	104	52.9
Achn380191	Actinidia chinensis	HOM04D006474	ORTHO04D007696	2.4e-22	108.2	100	55.0
Achn332091	Actinidia chinensis	HOM04D006474	ORTHO04D007696	9.9e-21	102.8	100	55.0
HBR0022G004	Hevea brasiliensis	HOM04D006474	ORTHO04D007696	1.4e-19	99.0	84	58.3
SMO329G0076	Selaginella moellendorffii	HOM04D006474	ORTHO04D007696	1.6e-18	95.5	131	37.4
AUR62010601	Chenopodium quinoa	HOM04D000062	ORTHO04D007696	2.7e-18	94.7	100	50.0
AUR62017243	Chenopodium quinoa	HOM04D006474	ORTHO04D007696	3.5e-18	94.4	98	51.0
Pp3c20_8200	Physcomitrium patens	HOM04D006474	ORTHO04D007696	4.0e-14	80.9	125	38.4
Glyma.05G087800	Glycine max	HOM04D006474	ORTHO04D007696	1.7e-12	75.5	73	52.1
AT2G32500	Arabidopsis thaliana	HOM04D006474	ORTHO04D007696	4.2e-11	70.9	64	53.1
Glyma.01G092700	Glycine max	HOM04D006474	ORTHO04D007696	4.2e-11	70.9	71	47.9
Mapoly0086s0010	Marchantia polymorpha	HOM04D006474	ORTHO04D007696	9.3e-11	69.7	129	32.6
Pp3c8_19270	Physcomitrium patens	HOM04D006474	ORTHO04D007696	3.7e-07	57.8	127	28.3
Mapoly0086s0005	Marchantia polymorpha	HOM04D006474	ORTHO04D007696	1.1e-06	56.2	121	28.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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