Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Gorai.008G189400	Gossypium raimondii	HOM04D006474	ORTHO04D007696	4.3e-159	563.5	282	100.0
COL.COLO4_11251	Corchorus olitorius	HOM04D006474	ORTHO04D007696	1.7e-107	392.1	270	73.3
Potri.014G154900	Populus trichocarpa	HOM04D006474	ORTHO04D007696	2.9e-86	321.6	248	64.1
Ciclev10016122m.g	Citrus clementina	HOM04D006474	ORTHO04D007696	1.0e-83	313.2	239	65.3
Eucgr.D01883	Eucalyptus grandis	HOM04D006474	ORTHO04D007696	1.7e-83	312.4	239	63.6
Cpa.g.sc39.21	Carica papaya	HOM04D006474	ORTHO04D007696	1.9e-82	308.9	223	68.6
THA.LOC104800995	Tarenaya hassleriana	HOM04D006474	ORTHO04D007696	3.3e-82	308.1	283	56.9
GSVIVG01019803001	Vitis vinifera	HOM04D006474	ORTHO04D007696	3.3e-82	308.1	249	62.2
Glyma.05G205300	Glycine max	HOM04D006474	ORTHO04D007696	5.6e-82	307.4	279	56.6
ZJU.LOC107429939	Ziziphus jujuba	HOM04D006474	ORTHO04D007696	9.5e-82	306.6	244	60.2
Cc08_g14300	Coffea canephora	HOM04D006474	ORTHO04D007696	1.2e-81	306.2	225	66.2
MELO3C016345	Cucumis melo	HOM04D006474	ORTHO04D007696	3.6e-81	304.7	239	63.6
C.cajan_11508.g	Cajanus cajan	HOM04D006474	ORTHO04D007696	6.2e-81	303.9	279	56.6
Prupe.5G095100	Prunus persica	HOM04D006474	ORTHO04D007696	6.8e-80	300.4	248	59.7
TPR.G12841	Trifolium pratense	HOM04D006474	ORTHO04D007696	1.2e-79	299.7	269	58.0
Medtr8g096960	Medicago truncatula	HOM04D006474	ORTHO04D007696	4.4e-79	297.7	248	58.9
Pbr011024.1.g	Pyrus bretschneideri	HOM04D006474	ORTHO04D007696	1.3e-78	296.2	243	58.8
Migut.A00797	Erythranthe guttata	HOM04D006474	ORTHO04D007696	3.7e-78	294.7	249	57.4
Glyma.08G012200	Glycine max	HOM04D006474	ORTHO04D007696	4.9e-78	294.3	279	55.2
Ca_05722.g	Cicer arietinum	HOM04D006474	ORTHO04D007696	6.4e-78	293.9	276	55.1
Bv5_100700_zcuq	Beta vulgaris	HOM04D006474	ORTHO04D007696	1.4e-77	292.7	249	60.2
AH018659	Amaranthus hypochondriacus	HOM04D006474	ORTHO04D007696	1.4e-77	292.7	250	59.6
Bo3g026700	Brassica oleracea	HOM04D006474	ORTHO04D007696	2.4e-77	292.0	263	55.5
CAN.G26.17	Capsicum annuum	HOM04D006474	ORTHO04D007696	3.2e-77	291.6	277	52.3
AL4G27880	Arabidopsis lyrata	HOM04D006474	ORTHO04D007696	1.6e-76	289.3	262	55.7
Manes.12G073000	Manihot esculenta	HOM04D006474	ORTHO04D007696	4.6e-76	287.7	265	60.0
Tp4g14850	Schrenkiella parvula	HOM04D006474	ORTHO04D007696	1.0e-75	286.6	270	52.6
Brara.C01653	Brassica rapa	HOM04D006474	ORTHO04D007696	3.0e-75	285.0	226	60.2
PGSC0003DMG400004251	Solanum tuberosum	HOM04D006474	ORTHO04D007696	6.6e-75	283.9	253	53.8
DCAR_008412	Daucus carota	HOM04D006474	ORTHO04D007696	6.6e-75	283.9	226	62.4
Carubv10023899m.g	Capsella rubella	HOM04D006474	ORTHO04D007696	1.9e-74	282.3	227	59.9
Solyc12g056350.1	Solanum lycopersicum	HOM04D006474	ORTHO04D007696	3.3e-74	281.6	252	53.2
Cucsa.106890	Cucumis sativus L.	HOM04D006474	ORTHO04D007696	2.2e-70	268.9	227	59.5
ATR0680G238	Amborella trichopoda	HOM04D006474	ORTHO04D007696	1.4e-69	266.2	229	57.2
Achn380191	Actinidia chinensis	HOM04D006474	ORTHO04D007696	1.0e-67	260.0	213	62.0
MDO.mRNA.g.408.1	Malus domestica	HOM04D006474	ORTHO04D007696	2.3e-67	258.8	200	62.0
NNU_21048	Nelumbo nucifera	HOM04D006474	ORTHO04D007696	8.6e-67	256.9	199	63.8
HBR0022G004	Hevea brasiliensis	HOM04D006474	ORTHO04D007696	4.3e-66	254.6	226	60.2
Peaxi162Scf01294g00327	Petunia axillaris	HOM04D006474	ORTHO04D007696	3.6e-65	251.5	226	54.4
AUR62010601	Chenopodium quinoa	HOM04D000062	ORTHO04D007696	1.1e-64	250.0	218	59.2
AUR62017243	Chenopodium quinoa	HOM04D006474	ORTHO04D007696	1.4e-64	249.6	219	57.5
Zm00001d048515	Zea mays	HOM04D006474	ORTHO04D007696	9.9e-63	243.4	229	51.5
AT2G32500	Arabidopsis thaliana	HOM04D006474	ORTHO04D007696	2.7e-52	208.8	179	58.7
PAB00044629	Picea abies	HOM04D006474	ORTHO04D007696	4.2e-45	184.9	242	41.3
SMO329G0076	Selaginella moellendorffii	HOM04D006474	ORTHO04D007696	1.3e-43	179.9	223	40.8
Pp3c20_8200	Physcomitrium patens	HOM04D006474	ORTHO04D007696	4.8e-41	171.4	221	40.7
FVE32428	Fragaria vesca	HOM04D006474	ORTHO04D007696	4.8e-41	171.4	162	55.6
Vradi07g30290	Vigna radiata var. radiata	HOM04D006474	ORTHO04D007696	6.2e-33	144.4	149	49.0
Achn332091	Actinidia chinensis	HOM04D006474	ORTHO04D007696	2.4e-32	142.5	113	66.4
LOC_Os03g02020	Oryza sativa ssp. japonica	HOM04D006474	ORTHO04D007696	1.3e-30	136.7	129	52.7
UGI.Scf00731.22012	Utricularia gibba	HOM04D006474	ORTHO04D007696	6.1e-28	127.9	127	48.0
AUR62042944	Chenopodium quinoa	HOM04D006474	ORTHO04D007696	1.3e-27	126.7	137	47.4
Potri.002G228100	Populus trichocarpa	HOM04D006474	ORTHO04D007696	1.6e-25	119.8	94	58.5
Mapoly0086s0010	Marchantia polymorpha	HOM04D006474	ORTHO04D007696	4.8e-25	118.2	235	28.1
Pp3c7_1410	Physcomitrium patens	HOM04D006474	ORTHO04D007696	5.3e-24	114.8	205	31.7
Mapoly0086s0005	Marchantia polymorpha	HOM04D006474	ORTHO04D007696	3.2e-21	105.5	215	28.4
Glyma.05G087800	Glycine max	HOM04D006474	ORTHO04D007696	4.8e-17	91.7	77	58.4
Pp3c8_19270	Physcomitrium patens	HOM04D006474	ORTHO04D007696	8.2e-17	90.9	229	28.8
Glyma.01G092700	Glycine max	HOM04D006474	ORTHO04D007696	3.4e-15	85.5	85	52.9
Carubv10024942m.g	Capsella rubella	HOM04D003251	ORTHO04D004010	9.7e-10	67.4	264	23.9
AL4G26910	Arabidopsis lyrata	HOM04D003251	ORTHO04D004010	2.8e-09	65.9	263	23.2
AT2G31670	Arabidopsis thaliana	HOM04D003251	ORTHO04D004010	4.8e-09	65.1	263	23.6
Tp3g21430	Schrenkiella parvula	HOM04D003251	ORTHO04D004010	4.1e-08	62.0	219	23.7
PAB00013481	Picea abies	HOM04D006474	ORTHO04D007696	1.2e-07	60.5	44	61.4
Cla016857.g	Citrullus lanatus	HOM04D003251	ORTHO04D004010	2.0e-07	59.7	220	20.5
Brara.A02617	Brassica rapa	HOM04D003251	ORTHO04D004010	2.6e-07	59.3	217	24.4
SMO307G0050	Selaginella moellendorffii	HOM04D020750	ORTHO04D007696	5.9e-07	58.2	209	27.3
Cucsa.117280	Cucumis sativus L.	HOM04D003251	ORTHO04D004010	7.7e-07	57.8	220	21.8
Bo1g101440	Brassica oleracea	HOM04D003251	ORTHO04D004010	1.3e-06	57.0	215	24.7
Ciclev10012522m.g	Citrus clementina	HOM04D003251	ORTHO04D004010	2.2e-06	56.2	217	21.2
Potri.T022500	Populus trichocarpa	HOM04D003251	ORTHO04D004010	2.2e-06	56.2	219	21.5
MELO3C004648	Cucumis melo	HOM04D003251	ORTHO04D004010	2.2e-06	56.2	226	20.4
THA.LOC104815326	Tarenaya hassleriana	HOM04D003251	ORTHO04D004010	2.9e-06	55.8	215	23.3
Gorai.009G034900	Gossypium raimondii	HOM04D003251	ORTHO04D004010	3.8e-06	55.5	222	20.3
NNU_11843	Nelumbo nucifera	HOM04D003251	ORTHO04D004010	6.5e-06	54.7	225	21.8
AH014565	Amaranthus hypochondriacus	HOM04D003251	ORTHO04D004010	8.5e-06	54.3	169	25.4
Mapoly0152s0021	Marchantia polymorpha	HOM04D006474	ORTHO04D004010	8.5e-06	54.3	174	28.2

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment