Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Glyma.02G092900	Glycine max	HOM04D007051	ORTHO04D009177	1.9e-117	424.9	222	100.0
Glyma.18G289500	Glycine max	HOM04D007051	ORTHO04D009177	8.8e-91	336.3	309	63.1
C.cajan_25875.g	Cajanus cajan	HOM04D007051	ORTHO04D009177	7.7e-87	323.2	309	61.8
Vradi04g10740	Vigna radiata var. radiata	HOM04D007051	ORTHO04D009177	4.1e-80	300.8	309	57.3
Ca_21027.g	Cicer arietinum	HOM04D007051	ORTHO04D009177	5.4e-72	273.9	309	53.1
Medtr7g024560	Medicago truncatula	HOM04D007051	ORTHO04D009177	1.4e-67	259.2	309	49.8
TPR.G15525	Trifolium pratense	HOM04D007051	ORTHO04D009177	3.7e-65	251.1	242	57.9
GSVIVG01016535001	Vitis vinifera	HOM04D007051	ORTHO04D009177	2.6e-58	228.4	240	50.8
TCA.TCM_042786	Theobroma cacao	HOM04D007051	ORTHO04D009177	9.8e-58	226.5	240	51.2
ZJU.LOC107413528	Ziziphus jujuba	HOM04D007051	ORTHO04D009177	6.0e-55	217.2	307	43.3
Ciclev10032197m.g	Citrus clementina	HOM04D007051	ORTHO04D009177	1.7e-54	215.7	240	48.8
Achn007321	Actinidia chinensis	HOM04D007051	ORTHO04D009177	8.6e-54	213.4	307	42.7
Cpa.g.sc1.397	Carica papaya	HOM04D007051	ORTHO04D009177	1.1e-53	213.0	254	45.7
Gorai.011G257200	Gossypium raimondii	HOM04D007051	ORTHO04D009177	3.3e-53	211.5	240	48.8
Prupe.2G233400	Prunus persica	HOM04D007051	ORTHO04D009177	4.3e-53	211.1	307	42.3
Cc02_g07990	Coffea canephora	HOM04D007051	ORTHO04D009177	2.3e-51	205.3	240	44.6
Potri.010G205900	Populus trichocarpa	HOM04D007051	ORTHO04D009177	3.4e-50	201.4	241	47.7
FVE26633	Fragaria vesca	HOM04D007051	ORTHO04D009177	5.8e-50	200.7	307	39.7
Manes.07G114900	Manihot esculenta	HOM04D007051	ORTHO04D009177	9.9e-50	199.9	240	47.1
Migut.F01500	Erythranthe guttata	HOM04D007051	ORTHO04D009177	1.1e-48	196.4	240	41.7
Peaxi162Scf00658g00728	Petunia axillaris	HOM04D007051	ORTHO04D009177	1.1e-48	196.4	225	48.9
Pbr032360.1.g	Pyrus bretschneideri	HOM04D007051	ORTHO04D009177	4.6e-47	191.0	313	39.3
Bv2_037580_kgso	Beta vulgaris	HOM04D007051	ORTHO04D009177	7.8e-47	190.3	238	45.4
Solyc06g043070.2	Solanum lycopersicum	HOM04D007051	ORTHO04D009177	3.0e-46	188.3	238	42.0
DCAR_027635	Daucus carota	HOM04D007051	ORTHO04D009177	1.5e-45	186.0	240	41.7
MDO.mRNA.g.130.30	Malus domestica	HOM04D007051	ORTHO04D009177	3.3e-45	184.9	218	46.3
Cla004678.g	Citrullus lanatus	HOM04D007051	ORTHO04D009177	5.6e-45	184.1	240	42.1
ATR0559G284	Amborella trichopoda	HOM04D007051	ORTHO04D009177	8.1e-44	180.3	240	41.7
Cucsa.010670	Cucumis sativus L.	HOM04D007051	ORTHO04D009177	1.8e-43	179.1	240	41.2
AUR62038352	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	6.8e-43	177.2	240	40.4
COL.COLO4_14997	Corchorus olitorius	HOM04D007051	ORTHO04D009177	5.8e-42	174.1	270	40.4
THA.LOC104799346	Tarenaya hassleriana	HOM04D007051	ORTHO04D009177	6.4e-41	170.6	243	39.5
Bo5g148450	Brassica oleracea	HOM04D007051	ORTHO04D009177	1.9e-40	169.1	241	39.8
AH023452	Amaranthus hypochondriacus	HOM04D007051	ORTHO04D009177	5.4e-40	167.5	242	38.4
MELO3C021650	Cucumis melo	HOM04D007051	ORTHO04D009177	5.4e-40	167.5	240	38.8
Brara.E03472	Brassica rapa	HOM04D007051	ORTHO04D009177	7.1e-40	167.2	241	39.4
Tp3g03000	Schrenkiella parvula	HOM04D007051	ORTHO04D009177	1.7e-38	162.5	241	38.6
AT3G04020	Arabidopsis thaliana	HOM04D007051	ORTHO04D009177	2.8e-36	155.2	241	36.9
Ca_21025.g	Cicer arietinum	HOM04D007051	ORTHO04D009177	2.8e-36	155.2	134	60.4
RCO.g.29887.000005	Ricinus communis	HOM04D007051	ORTHO04D009177	8.1e-36	153.7	184	46.2
Carubv10014253m.g	Capsella rubella	HOM04D007051	ORTHO04D009177	1.4e-35	152.9	241	35.7
AL3G13930	Arabidopsis lyrata	HOM04D007051	ORTHO04D009177	9.0e-35	150.2	241	36.1
C.cajan_08197.g	Cajanus cajan	HOM04D007051	ORTHO04D009177	3.8e-33	144.8	92	81.5
LOC_Os03g16870	Oryza sativa ssp. japonica	HOM04D007051	ORTHO04D009177	8.4e-33	143.7	241	36.9
UGI.Scf00066.6132	Utricularia gibba	HOM04D007051	ORTHO04D009177	3.2e-32	141.7	228	39.5
Eucgr.J00020	Eucalyptus grandis	HOM04D007051	ORTHO04D009177	1.1e-29	133.3	139	49.6
Zm00001d028631	Zea mays	HOM04D007051	ORTHO04D009177	3.1e-27	125.2	238	34.0
Pp3c12_11030	Physcomitrium patens	HOM04D007051	ORTHO04D009177	6.2e-20	100.9	234	30.3
Mapoly0002s0030	Marchantia polymorpha	HOM04D007051	ORTHO04D009177	1.1e-13	80.1	250	26.0
AUR62041861	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	3.7e-12	75.1	82	42.7
Achn037351	Actinidia chinensis	HOM04D007051	ORTHO04D009177	1.0e-09	67.0	81	48.1
MDO.mRNA.g.706.21	Malus domestica	HOM04D007051	ORTHO04D009177	1.9e-08	62.8	56	53.6
Achn037341	Actinidia chinensis	HOM04D007051	ORTHO04D032427	1.6e-07	59.7	44	61.4

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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