Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Cre10.g424150	Chlamydomonas reinhardtii	HOM04D004720	ORTHO04D005839	1.7e-59	231.5	120	100.0
Cucsa.088430	Cucumis sativus L.	HOM04D004720	ORTHO04D005839	2.3e-13	78.2	100	38.0
MELO3C008106	Cucumis melo	HOM04D004720	ORTHO04D005839	4.0e-13	77.4	100	38.0
GSVIVG01009213001	Vitis vinifera	HOM04D004720	ORTHO04D005839	4.0e-13	77.4	100	38.0
ZJU.LOC107421332	Ziziphus jujuba	HOM04D004720	ORTHO04D005839	5.2e-13	77.0	100	37.0
MELO3C008105	Cucumis melo	HOM04D004720	ORTHO04D005839	6.8e-13	76.6	100	38.0
Migut.N01147	Erythranthe guttata	HOM04D004720	ORTHO04D005839	8.9e-13	76.3	100	37.0
NNU_05220	Nelumbo nucifera	HOM04D004720	ORTHO04D005839	8.9e-13	76.3	100	38.0
HBR2437G042	Hevea brasiliensis	HOM04D004720	ORTHO04D005839	8.9e-13	76.3	100	38.0
Medtr7g005540	Medicago truncatula	HOM04D004720	ORTHO04D005839	1.2e-12	75.9	100	38.0
TPR.G15622	Trifolium pratense	HOM04D004720	ORTHO04D005839	1.2e-12	75.9	100	37.0
RCO.g.29596.000023	Ricinus communis	HOM04D004720	ORTHO04D005839	1.5e-12	75.5	100	37.0
Manes.18G057000	Manihot esculenta	HOM04D004720	ORTHO04D005839	1.5e-12	75.5	100	37.0
C.cajan_04776.g	Cajanus cajan	HOM04D004720	ORTHO04D005839	1.5e-12	75.5	100	37.0
Glyma.02G216100	Glycine max	HOM04D004720	ORTHO04D005839	2.0e-12	75.1	100	37.0
COL.COLO4_35286	Corchorus olitorius	HOM04D004720	ORTHO04D005839	2.0e-12	75.1	100	37.0
Cpa.g.sc21.43	Carica papaya	HOM04D004720	ORTHO04D005839	2.0e-12	75.1	100	37.0
FVE26577	Fragaria vesca	HOM04D004720	ORTHO04D005839	2.0e-12	75.1	100	37.0
Prupe.1G536300	Prunus persica	HOM04D004720	ORTHO04D005839	2.0e-12	75.1	100	37.0
ATR0691G175	Amborella trichopoda	HOM04D004720	ORTHO04D005839	2.6e-12	74.7	100	37.0
Bv8_182920_hcmi	Beta vulgaris	HOM04D004720	ORTHO04D005839	2.6e-12	74.7	100	37.0
Ciclev10002917m.g	Citrus clementina	HOM04D004720	ORTHO04D005839	3.4e-12	74.3	100	37.0
Brara.K01502	Brassica rapa	HOM04D004720	ORTHO04D005839	3.4e-12	74.3	100	37.0
Brara.H01608	Brassica rapa	HOM04D004720	ORTHO04D005839	3.4e-12	74.3	100	36.0
Bo8g050310	Brassica oleracea	HOM04D004720	ORTHO04D005839	3.4e-12	74.3	100	36.0
Bo1g038970	Brassica oleracea	HOM04D004720	ORTHO04D005839	4.4e-12	73.9	100	37.0
Brara.A01449	Brassica rapa	HOM04D004720	ORTHO04D005839	4.4e-12	73.9	100	37.0
Bv9_209360_kxoh	Beta vulgaris	HOM04D004720	ORTHO04D005839	4.4e-12	73.9	100	37.0
Gorai.009G278800	Gossypium raimondii	HOM04D004720	ORTHO04D005839	5.8e-12	73.6	100	36.0
LOC_Os05g01710	Oryza sativa ssp. japonica	HOM04D004720	ORTHO04D005839	5.8e-12	73.6	100	36.0
TCA.TCM_034542	Theobroma cacao	HOM04D004720	ORTHO04D005839	5.8e-12	73.6	100	36.0
DCAR_006444	Daucus carota	HOM04D004720	ORTHO04D005839	5.8e-12	73.6	100	36.0
Eucgr.F00436	Eucalyptus grandis	HOM04D004720	ORTHO04D005839	5.8e-12	73.6	100	37.0
Potri.005G151700	Populus trichocarpa	HOM04D004720	ORTHO04D005839	7.5e-12	73.2	100	37.0
Achn126161	Actinidia chinensis	HOM04D004720	ORTHO04D005839	7.5e-12	73.2	100	37.0
PGSC0003DMG400002052	Solanum tuberosum	HOM04D004720	ORTHO04D005839	7.5e-12	73.2	100	37.0
HBR0453G008	Hevea brasiliensis	HOM04D004720	ORTHO04D005839	9.8e-12	72.8	100	37.0
Cc10_g08370	Coffea canephora	HOM04D004720	ORTHO04D005839	9.8e-12	72.8	100	35.0
Carubv10006082m.g	Capsella rubella	HOM04D004720	ORTHO04D005839	9.8e-12	72.8	100	36.0
Tp7g22400	Schrenkiella parvula	HOM04D004720	ORTHO04D005839	9.8e-12	72.8	100	36.0
AL7G28780	Arabidopsis lyrata	HOM04D004720	ORTHO04D005839	9.8e-12	72.8	100	36.0
AT4G24440	Arabidopsis thaliana	HOM04D004720	ORTHO04D005839	9.8e-12	72.8	100	36.0
Solyc12g088030.1	Solanum lycopersicum	HOM04D004720	ORTHO04D005839	9.8e-12	72.8	100	37.0
CAN.G1104.8	Capsicum annuum	HOM04D004720	ORTHO04D005839	9.8e-12	72.8	100	37.0
LOC_Os01g73890	Oryza sativa ssp. japonica	HOM04D004720	ORTHO04D005839	9.8e-12	72.8	100	37.0
THA.LOC104815469	Tarenaya hassleriana	HOM04D004720	ORTHO04D005839	1.3e-11	72.4	100	36.0
THA.LOC104799853	Tarenaya hassleriana	HOM04D004720	ORTHO04D005839	1.3e-11	72.4	100	36.0
NNU_12908	Nelumbo nucifera	HOM04D004720	ORTHO04D005839	1.3e-11	72.4	100	35.0
Glyma.14G183100	Glycine max	HOM04D004720	ORTHO04D005839	1.7e-11	72.0	100	36.0
Araip.KZ8MV	Arachis ipaensis	HOM04D004720	ORTHO04D005839	2.2e-11	71.6	100	35.0
TPR.G38776	Trifolium pratense	HOM04D004720	ORTHO04D005839	2.2e-11	71.6	100	36.0
Mapoly0012s0108	Marchantia polymorpha	HOM04D004720	ORTHO04D005839	2.9e-11	71.2	110	35.5
Gorai.009G228000	Gossypium raimondii	HOM04D004720	ORTHO04D005839	3.7e-11	70.9	100	35.0
Pp3c15_13540	Physcomitrium patens	HOM04D004720	ORTHO04D005839	3.7e-11	70.9	110	33.6
Peaxi162Scf00160g00913	Petunia axillaris	HOM04D004720	ORTHO04D005839	4.9e-11	70.5	100	35.0
Pp3c9_10830	Physcomitrium patens	HOM04D004720	ORTHO04D005839	6.4e-11	70.1	110	33.6
HBR2263G013	Hevea brasiliensis	HOM04D004720	ORTHO04D005839	6.4e-11	70.1	100	34.0
Zm00001d041969	Zea mays	HOM04D004720	ORTHO04D005839	8.3e-11	69.7	116	31.0
AH000296	Amaranthus hypochondriacus	HOM04D004720	ORTHO04D005839	1.4e-10	68.9	100	35.0
Medtr5g066740	Medicago truncatula	HOM04D004720	ORTHO04D005839	1.6e-09	65.5	100	31.0
Zm00001d011092	Zea mays	HOM04D004720	ORTHO04D005839	2.1e-09	65.1	113	32.7
AUR62017035	Chenopodium quinoa	HOM04D004720	ORTHO04D005839	1.0e-08	62.8	87	37.9
UGI.Scf00031.3644	Utricularia gibba	HOM04D004720	ORTHO04D005839	2.3e-08	61.6	97	37.1
Bo7g109530	Brassica oleracea	HOM04D004720	ORTHO04D005839	1.1e-07	59.3	100	32.0
Migut.B00439	Erythranthe guttata	HOM04D004720	ORTHO04D005839	1.9e-07	58.5	110	32.7
Achn222601	Actinidia chinensis	HOM04D004720	ORTHO04D005839	4.3e-07	57.4	128	28.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment