Interactive Phylogenetics Module

Gene Id
COL.COLO4_38312

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_38312 Corchorus olitorius HOM04D004611 ORTHO04D005667 1.5e-99 365.2 183 100.0
TCA.TCM_035451 Theobroma cacao HOM04D004611 ORTHO04D005667 2.5e-30 135.2 84 73.8
Gorai.013G105000 Gossypium raimondii HOM04D004611 ORTHO04D005667 3.6e-29 131.3 76 77.6
GSVIVG01010038001 Vitis vinifera HOM04D004611 ORTHO04D005667 2.3e-28 128.6 84 71.4
Ciclev10000721m.g Citrus clementina HOM04D004611 ORTHO04D005667 1.5e-27 125.9 84 70.2
Solyc04g064820.2 Solanum lycopersicum HOM04D004611 ORTHO04D005667 1.9e-27 125.6 84 71.4
Eucgr.F02736 Eucalyptus grandis HOM04D004611 ORTHO04D005667 3.3e-27 124.8 84 70.2
CAN.G744.14 Capsicum annuum HOM04D004611 ORTHO04D005667 3.3e-27 124.8 84 71.4
Potri.005G188000 Populus trichocarpa HOM04D004611 ORTHO04D005667 3.3e-27 124.8 84 70.2
Manes.18G088000 Manihot esculenta HOM04D004611 ORTHO04D005667 4.3e-27 124.4 84 67.9
Peaxi162Scf00263g00417 Petunia axillaris HOM04D004611 ORTHO04D005667 4.3e-27 124.4 84 70.2
Cla013857.g Citrullus lanatus HOM04D004611 ORTHO04D005667 7.4e-27 123.6 84 67.9
MELO3C008406 Cucumis melo HOM04D004611 ORTHO04D005667 7.4e-27 123.6 84 67.9
Pbr002599.1.g Pyrus bretschneideri HOM04D004611 ORTHO04D005667 7.4e-27 123.6 84 70.2
Pbr002591.1.g Pyrus bretschneideri HOM04D004611 ORTHO04D005667 7.4e-27 123.6 84 70.2
Potri.002G071600 Populus trichocarpa HOM04D004611 ORTHO04D005667 9.7e-27 123.2 84 69.0
Cucsa.077050 Cucumis sativus L. HOM04D004611 ORTHO04D005667 1.3e-26 122.9 84 67.9
Bv_005240_zzjk Beta vulgaris HOM04D004611 ORTHO04D005667 2.2e-26 122.1 70 78.6
Pbr039391.2.g Pyrus bretschneideri HOM04D004611 ORTHO04D005667 2.2e-26 122.1 84 69.0
UGI.Scf00018.2409 Utricularia gibba HOM04D004611 ORTHO04D005667 2.2e-26 122.1 76 75.0
HBR0593G036 Hevea brasiliensis HOM04D004611 ORTHO04D005667 3.7e-26 121.3 84 67.9
MDO.mRNA.g.437.5 Malus domestica HOM04D004611 ORTHO04D005667 3.7e-26 121.3 84 69.0
ATR0706G031 Amborella trichopoda HOM04D004611 ORTHO04D005667 4.8e-26 120.9 98 61.2
Manes.02G175600 Manihot esculenta HOM04D004611 ORTHO04D005667 1.1e-25 119.8 84 66.7
Araip.TSB39 Arachis ipaensis HOM04D004611 ORTHO04D005667 1.4e-25 119.4 70 77.1
Araip.HNL72 Arachis ipaensis HOM04D004611 ORTHO04D005667 1.4e-25 119.4 70 77.1
C.cajan_42679.g Cajanus cajan HOM04D004611 ORTHO04D005667 1.8e-25 119.0 84 65.5
Ca_03932.g Cicer arietinum HOM04D004611 ORTHO04D005667 1.8e-25 119.0 84 65.5
THA.LOC104810036 Tarenaya hassleriana HOM04D004611 ORTHO04D005667 3.1e-25 118.2 76 73.7
NNU_01715 Nelumbo nucifera HOM04D004611 ORTHO04D005667 5.3e-25 117.5 78 70.5
Prupe.8G019800 Prunus persica HOM04D004611 ORTHO04D005667 5.3e-25 117.5 84 67.9
Achn290281 Actinidia chinensis HOM04D004611 ORTHO04D005667 6.9e-25 117.1 84 64.3
AH006554 Amaranthus hypochondriacus HOM04D004611 ORTHO04D005667 9.1e-25 116.7 84 63.1
AUR62020958 Chenopodium quinoa HOM04D004611 ORTHO04D005667 1.2e-24 116.3 70 75.7
AUR62018460 Chenopodium quinoa HOM04D004611 ORTHO04D005667 1.2e-24 116.3 70 75.7
Migut.N03233 Erythranthe guttata HOM04D004611 ORTHO04D005667 1.5e-24 115.9 84 65.5
DCAR_023123 Daucus carota HOM04D004611 ORTHO04D005667 2.0e-24 115.5 70 75.7
LOC_Os02g24134 Oryza sativa ssp. japonica HOM04D004611 ORTHO04D005667 2.0e-24 115.5 102 56.9
Vradi0183s00370 Vigna radiata var. radiata HOM04D004611 ORTHO04D005667 3.4e-24 114.8 84 61.9
Carubv10020029m.g Capsella rubella HOM04D004611 ORTHO04D005667 4.5e-24 114.4 84 65.5
AL2G37320 Arabidopsis lyrata HOM04D004611 ORTHO04D005667 4.5e-24 114.4 84 65.5
Zm00001d049522 Zea mays HOM04D004611 ORTHO04D005667 4.5e-24 114.4 102 54.9
Cc03_g13150 Coffea canephora HOM04D004611 ORTHO04D005667 5.9e-24 114.0 78 69.2
Bo2g092290 Brassica oleracea HOM04D004611 ORTHO04D005667 5.9e-24 114.0 84 65.5
Glyma.06G123000 Glycine max HOM04D004611 ORTHO04D005667 5.9e-24 114.0 84 63.1
Brara.B02172 Brassica rapa HOM04D004611 ORTHO04D005667 5.9e-24 114.0 84 65.5
TPR.G18763 Trifolium pratense HOM04D004611 ORTHO04D005667 7.7e-24 113.6 84 63.1
Medtr3g090170 Medicago truncatula HOM04D004611 ORTHO04D005667 1.0e-23 113.2 84 63.1
Cpa.g.sc49.56 Carica papaya HOM04D004611 ORTHO04D005667 1.0e-23 113.2 84 65.5
PAB00062221 Picea abies HOM04D004611 ORTHO04D005667 1.0e-23 113.2 78 69.2
Tp5g32320 Schrenkiella parvula HOM04D004611 ORTHO04D005667 1.0e-23 113.2 84 64.3
Glyma.04G240400 Glycine max HOM04D004611 ORTHO04D005667 1.3e-23 112.8 84 61.9
AT1G77140 Arabidopsis thaliana HOM04D004611 ORTHO04D005667 1.3e-23 112.8 76 69.7
Bo6g082240 Brassica oleracea HOM04D004611 ORTHO04D005667 2.2e-23 112.1 70 77.1
Bo6g082230 Brassica oleracea HOM04D004611 ORTHO04D005667 2.2e-23 112.1 70 77.1
RCO.g.27985.000032 Ricinus communis HOM04D004611 ORTHO04D005667 8.5e-23 110.2 78 65.4
Achn120831 Actinidia chinensis HOM04D004611 ORTHO04D005667 1.9e-22 109.0 84 60.7
ZJU.LOC107421618 Ziziphus jujuba HOM04D004611 ORTHO04D005667 9.4e-22 106.7 76 68.4
FVE32692 Fragaria vesca HOM04D004611 ORTHO04D005667 2.1e-21 105.5 74 71.6
SMO118G0298 Selaginella moellendorffii HOM04D004611 ORTHO04D005667 4.7e-21 104.4 70 61.4
COL.COLO4_03835 Corchorus olitorius HOM04D004611 ORTHO04D005667 7.9e-21 103.6 48 93.8
COL.COLO4_26192 Corchorus olitorius HOM04D000009 ORTHO04D002975 1.4e-20 102.8 66 81.8
COL.COLO4_38311 Corchorus olitorius HOM04D004611 ORTHO04D005667 3.9e-20 101.3 48 91.7
Pp3c18_21360 Physcomitrium patens HOM04D004611 ORTHO04D005667 3.9e-20 101.3 70 64.3
Mapoly0133s0009 Marchantia polymorpha HOM04D004611 ORTHO04D005667 1.1e-19 99.8 76 57.9
TCA.TCM_034160 Theobroma cacao HOM04D000009 ORTHO04D002975 4.8e-18 94.4 66 75.8
HBR1924G003 Hevea brasiliensis HOM04D000009 ORTHO04D002975 4.5e-16 87.8 66 72.7
Manes.05G151900 Manihot esculenta HOM04D000009 ORTHO04D002975 5.9e-16 87.4 66 69.7
Ciclev10000083m.g Citrus clementina HOM04D000009 ORTHO04D002975 1.3e-15 86.3 66 69.7
Gorai.009G271000 Gossypium raimondii HOM04D000009 ORTHO04D002975 2.2e-15 85.5 66 69.7
ZJU.LOC107420401 Ziziphus jujuba HOM04D000009 ORTHO04D002975 5.0e-15 84.3 66 71.2
Potri.002G027400 Populus trichocarpa HOM04D000009 ORTHO04D002975 5.0e-15 84.3 66 69.7
Potri.005G235100 Populus trichocarpa HOM04D000009 ORTHO04D002975 6.5e-15 84.0 66 69.7
GSVIVG01009829001 Vitis vinifera HOM04D000009 ORTHO04D002975 1.4e-14 82.8 66 72.7
NNU_20109 Nelumbo nucifera HOM04D000009 ORTHO04D002975 9.4e-14 80.1 66 66.7
RCO.g.30170.000549 Ricinus communis HOM04D000009 ORTHO04D002975 1.2e-13 79.7 66 68.2
ZJU.LOC107409912 Ziziphus jujuba HOM04D000009 ORTHO04D002975 2.7e-13 78.6 63 68.3
Cpa.g.sc140.25 Carica papaya HOM04D000009 ORTHO04D002975 2.7e-13 78.6 66 68.2
Ca_01982.g Cicer arietinum HOM04D000009 ORTHO04D002975 2.7e-13 78.6 66 66.7
Gorai.010G006200 Gossypium raimondii HOM04D000009 ORTHO04D002975 3.6e-13 78.2 66 66.7
Prupe.7G166100 Prunus persica HOM04D000009 ORTHO04D002975 3.6e-13 78.2 66 65.2
DCAR_009947 Daucus carota HOM04D000009 ORTHO04D002975 3.6e-13 78.2 66 63.6
Medtr5g021670 Medicago truncatula HOM04D000009 ORTHO04D002975 3.6e-13 78.2 66 65.2
CAN.G1425.15 Capsicum annuum HOM04D000009 ORTHO04D017324 4.7e-13 77.8 83 56.6
Glyma.04G026700 Glycine max HOM04D000009 ORTHO04D002975 6.1e-13 77.4 66 65.2
Glyma.06G026600 Glycine max HOM04D000009 ORTHO04D002975 8.0e-13 77.0 66 65.2
Cucsa.043410 Cucumis sativus L. HOM04D000009 ORTHO04D002975 8.0e-13 77.0 66 65.2
Solyc02g084370.1 Solanum lycopersicum HOM04D000009 ORTHO04D002975 8.0e-13 77.0 65 66.2
CAN.G2049.1 Capsicum annuum HOM04D000009 ORTHO04D002975 8.0e-13 77.0 83 56.6
PGSC0003DMG400003551 Solanum tuberosum HOM04D000009 ORTHO04D002975 8.0e-13 77.0 65 66.2
FVE15228 Fragaria vesca HOM04D000009 ORTHO04D002975 1.4e-12 76.3 68 67.6
Cc07_g10500 Coffea canephora HOM04D000009 ORTHO04D002975 1.4e-12 76.3 66 63.6
MELO3C007887 Cucumis melo HOM04D000009 ORTHO04D002975 1.8e-12 75.9 66 63.6
C.cajan_12805.g Cajanus cajan HOM04D000009 ORTHO04D002975 3.9e-12 74.7 66 62.1
Achn201471 Actinidia chinensis HOM04D000009 ORTHO04D002975 3.9e-12 74.7 66 63.6
PGSC0003DMG400003714 Solanum tuberosum HOM04D000009 ORTHO04D002975 5.2e-12 74.3 66 65.2
Potri.007G014700 Populus trichocarpa HOM04D000009 ORTHO04D002975 6.7e-12 73.9 63 63.5
Medtr3g113140 Medicago truncatula HOM04D000009 ORTHO04D002975 8.8e-12 73.6 66 59.1
DCAR_022443 Daucus carota HOM04D000009 ORTHO04D002975 1.1e-11 73.2 66 63.6
Peaxi162Scf00287g00133 Petunia axillaris HOM04D000009 ORTHO04D002975 1.1e-11 73.2 66 63.6
Ca_04903.g Cicer arietinum HOM04D000009 ORTHO04D002975 2.0e-11 72.4 67 61.2
PGSC0003DMG400022565 Solanum tuberosum HOM04D000009 ORTHO04D002975 2.6e-11 72.0 66 60.6
Solyc04g081080.1 Solanum lycopersicum HOM04D000009 ORTHO04D002975 3.3e-11 71.6 66 62.1
Bo6g083430 Brassica oleracea HOM04D004611 ORTHO04D005667 5.7e-11 70.9 46 71.7
TPR.G30294 Trifolium pratense HOM04D000009 ORTHO04D002975 7.4e-11 70.5 67 59.7
Solyc03g033610.1 Solanum lycopersicum HOM04D000009 ORTHO04D002975 7.4e-11 70.5 66 60.6
AH003763 Amaranthus hypochondriacus HOM04D000009 ORTHO04D002975 9.7e-11 70.1 70 61.4
Peaxi162Scf00010g00022 Petunia axillaris HOM04D000009 ORTHO04D002975 9.7e-11 70.1 66 60.6
Pbr005875.1.g Pyrus bretschneideri HOM04D000009 ORTHO04D002975 2.2e-10 68.9 67 62.7
Vradi05g13670 Vigna radiata var. radiata HOM04D000009 ORTHO04D002975 2.8e-10 68.6 66 60.6
Migut.C00794 Erythranthe guttata HOM04D000009 ORTHO04D002975 4.8e-10 67.8 66 60.6
Pbr005874.1.g Pyrus bretschneideri HOM04D000009 ORTHO04D002975 6.3e-10 67.4 67 59.7
Pbr028098.1.g Pyrus bretschneideri HOM04D000009 ORTHO04D002975 6.3e-10 67.4 67 62.7
Eucgr.I02367 Eucalyptus grandis HOM04D000009 ORTHO04D002975 8.2e-10 67.0 66 59.1
Glyma.01G168100 Glycine max HOM04D000009 ORTHO04D002975 1.4e-09 66.2 67 58.2
Glyma.11G075200 Glycine max HOM04D000009 ORTHO04D002975 2.4e-09 65.5 67 56.7
THA.LOC104819763 Tarenaya hassleriana HOM04D000009 ORTHO04D002975 2.4e-09 65.5 67 59.7
Bv1_004920_expa Beta vulgaris HOM04D000009 ORTHO04D002975 3.1e-09 65.1 68 55.9
THA.LOC104811398 Tarenaya hassleriana HOM04D000009 ORTHO04D002975 4.1e-09 64.7 69 59.4
Cre07.g333950 Chlamydomonas reinhardtii HOM04D004611 ORTHO04D005667 5.3e-09 64.3 94 37.2
Eucgr.F03308 Eucalyptus grandis HOM04D000009 ORTHO04D002975 7.0e-09 63.9 66 62.1
Peaxi162Scf00083g00094 Petunia axillaris HOM04D000009 ORTHO04D002975 7.0e-09 63.9 52 67.3
AH008945 Amaranthus hypochondriacus HOM04D000009 ORTHO04D002975 9.1e-09 63.5 67 59.7
Migut.H01090 Erythranthe guttata HOM04D000009 ORTHO04D002975 9.1e-09 63.5 65 55.4
Tp7g33930 Schrenkiella parvula HOM04D000009 ORTHO04D002975 1.2e-08 63.2 71 57.7
AT1G75640 Arabidopsis thaliana HOM04D000009 ORTHO04D002975 4.5e-08 61.2 67 55.2
Carubv10019690m.g Capsella rubella HOM04D000009 ORTHO04D002975 4.5e-08 61.2 67 55.2
AUR62019156 Chenopodium quinoa HOM04D000009 ORTHO04D002975 4.5e-08 61.2 67 58.2
AUR62043930 Chenopodium quinoa HOM04D000009 ORTHO04D002975 4.5e-08 61.2 67 58.2
Pbr028097.1.g Pyrus bretschneideri HOM04D000009 ORTHO04D002975 7.7e-08 60.5 67 56.7
AL2G35620 Arabidopsis lyrata HOM04D000009 ORTHO04D002975 7.7e-08 60.5 67 55.2
Brara.A00234 Brassica rapa HOM04D000009 ORTHO04D002975 1.0e-07 60.1 68 57.4
Bo1g005800 Brassica oleracea HOM04D000009 ORTHO04D002975 1.0e-07 60.1 68 57.4
CAN.G785.2 Capsicum annuum HOM04D000009 ORTHO04D002975 1.0e-07 60.1 69 55.1
FVE07742 Fragaria vesca HOM04D000009 ORTHO04D002975 2.2e-07 58.9 52 63.5
MDO.mRNA.g.2884.18 Malus domestica HOM04D000009 ORTHO04D002975 2.9e-07 58.5 59 62.7
Tp5g30750 Schrenkiella parvula HOM04D000009 ORTHO04D002975 2.9e-07 58.5 69 55.1
Brara.G03365 Brassica rapa HOM04D000009 ORTHO04D002975 6.5e-07 57.4 67 53.7
Bo6g119760 Brassica oleracea HOM04D000009 ORTHO04D002975 6.5e-07 57.4 67 53.7
Bv1_004930_wapg Beta vulgaris HOM04D000009 ORTHO04D002975 1.1e-06 56.6 67 55.2
AUR62014420 Chenopodium quinoa HOM04D000009 ORTHO04D002975 1.1e-06 56.6 67 56.7
UGI.Scf00531.17062 Utricularia gibba HOM04D000009 ORTHO04D002975 1.1e-06 56.6 66 50.0
AUR62019157 Chenopodium quinoa HOM04D000009 ORTHO04D002975 1.5e-06 56.2 67 56.7
AUR62043928 Chenopodium quinoa HOM04D000009 ORTHO04D002975 1.5e-06 56.2 67 56.7
Cc10_g02060 Coffea canephora HOM04D000009 ORTHO04D002975 2.5e-06 55.5 58 58.6
AUR62014421 Chenopodium quinoa HOM04D000009 ORTHO04D002975 3.2e-06 55.1 67 55.2
C.cajan_34815.g Cajanus cajan HOM04D000009 ORTHO04D002975 4.2e-06 54.7 55 54.5
Gorai.007G196700 Gossypium raimondii HOM04D000009 ORTHO04D002975 7.2e-06 53.9 38 71.1

Actinidia chinensis (3 genes)
Amaranthus hypochondriacus (3 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis ipaensis (2 genes)
Beta vulgaris (3 genes)
Brassica oleracea (6 genes)
Brassica rapa (3 genes)
Cajanus cajan (3 genes)
Capsella rubella (2 genes)
Capsicum annuum (4 genes)
Carica papaya (2 genes)
Chenopodium quinoa (8 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (3 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (3 genes)
Corchorus olitorius (4 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (3 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (3 genes)
Fragaria vesca (3 genes)
Glycine max (6 genes)
Gossypium raimondii (4 genes)
Hevea brasiliensis (2 genes)
Malus domestica (2 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (3 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (4 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (5 genes)
Prunus persica (2 genes)
Pyrus bretschneideri (7 genes)
Ricinus communis (2 genes)
Schrenkiella parvula (3 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (4 genes)
Solanum tuberosum (3 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (2 genes)
Trifolium pratense (2 genes)
Utricularia gibba (2 genes)
Vigna radiata var. radiata (2 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)
Ziziphus jujuba (3 genes)

Program Settings