Interactive Phylogenetics Module

Gene Id
AT4G39840

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G39840 Arabidopsis thaliana HOM04D003656 ORTHO04D004526 3.9e-138 494.6 452 100.0
AL7G12070 Arabidopsis lyrata HOM04D003656 ORTHO04D004526 1.7e-125 452.6 247 99.2
Tp7g36050 Schrenkiella parvula HOM04D003656 ORTHO04D004526 2.7e-123 445.3 246 97.6
Bo1g002900 Brassica oleracea HOM04D003656 ORTHO04D004526 1.2e-121 439.9 248 91.1
Brara.A00075 Brassica rapa HOM04D003656 ORTHO04D004526 2.6e-121 438.7 245 91.8
Carubv10004748m.g Capsella rubella HOM04D003656 ORTHO04D004526 3.1e-119 431.8 242 96.7
Brara.H01774 Brassica rapa HOM04D003656 ORTHO04D004526 5.2e-114 414.5 252 89.3
THA.LOC104824872 Tarenaya hassleriana HOM04D003656 ORTHO04D004526 3.3e-108 395.2 248 81.0
THA.LOC104807698 Tarenaya hassleriana HOM04D003656 ORTHO04D004526 1.8e-106 389.4 245 82.0
Cpa.g.sc621.1 Carica papaya HOM04D003656 ORTHO04D004526 1.7e-101 372.9 245 78.4
MELO3C007762 Cucumis melo HOM04D003656 ORTHO04D004526 1.2e-99 366.7 244 75.4
COL.COLO4_09954 Corchorus olitorius HOM04D003656 ORTHO04D004526 1.1e-98 363.6 251 73.7
FVE16333 Fragaria vesca HOM04D003656 ORTHO04D004526 5.2e-98 361.3 243 74.1
Potri.005G076500 Populus trichocarpa HOM04D003656 ORTHO04D004526 1.2e-97 360.1 243 74.1
Ciclev10027598m.g Citrus clementina HOM04D003656 ORTHO04D004526 9.8e-97 357.1 236 76.3
TCA.TCM_001129 Theobroma cacao HOM04D003656 ORTHO04D004526 1.2e-94 350.1 251 71.3
Eucgr.I00428 Eucalyptus grandis HOM04D003656 ORTHO04D004526 2.7e-94 349.0 244 72.1
ZJU.LOC107425177 Ziziphus jujuba HOM04D003656 ORTHO04D004526 6.0e-94 347.8 244 72.1
Pbr003196.1.g Pyrus bretschneideri HOM04D003656 ORTHO04D004526 5.0e-93 344.7 251 70.1
Ca_12690.g Cicer arietinum HOM04D003656 ORTHO04D004526 8.6e-93 344.0 241 72.2
Prupe.6G184700 Prunus persica HOM04D003656 ORTHO04D004526 1.5e-92 343.2 245 71.4
DCAR_014230 Daucus carota HOM04D003656 ORTHO04D004526 2.5e-92 342.4 243 72.0
Bo3g152630 Brassica oleracea HOM04D003656 ORTHO04D004526 9.5e-92 340.5 247 76.9
Pbr030816.1.g Pyrus bretschneideri HOM04D003656 ORTHO04D004526 9.5e-92 340.5 251 69.3
Pbr031143.1.g Pyrus bretschneideri HOM04D003656 ORTHO04D004526 2.8e-91 339.0 251 69.3
Potri.007G091900 Populus trichocarpa HOM04D003656 ORTHO04D004526 3.6e-91 338.6 241 69.7
Gorai.003G038700 Gossypium raimondii HOM04D003656 ORTHO04D004526 6.2e-91 337.8 243 71.6
Medtr3g087360 Medicago truncatula HOM04D003656 ORTHO04D004526 1.4e-90 336.7 241 70.5
Medtr8g090265 Medicago truncatula HOM04D003656 ORTHO04D004526 1.5e-89 333.2 231 71.4
RCO.g.27889.000003 Ricinus communis HOM04D003656 ORTHO04D004526 5.8e-89 331.3 244 68.0
Cc00_g16220 Coffea canephora HOM04D003656 ORTHO04D004526 1.3e-88 330.1 248 68.5
Gorai.007G239400 Gossypium raimondii HOM04D003656 ORTHO04D004526 3.7e-88 328.6 249 70.3
NNU_20257 Nelumbo nucifera HOM04D003656 ORTHO04D004526 4.9e-88 328.2 244 69.3
C.cajan_39617.g Cajanus cajan HOM04D003656 ORTHO04D004526 2.4e-87 325.9 254 66.1
Vradi02g12690 Vigna radiata var. radiata HOM04D003656 ORTHO04D004526 5.4e-87 324.7 247 67.6
Manes.12G135900 Manihot esculenta HOM04D003656 ORTHO04D004526 7.1e-87 324.3 244 67.2
NNU_22475 Nelumbo nucifera HOM04D003656 ORTHO04D004526 1.6e-86 323.2 243 67.1
Glyma.08G136600 Glycine max HOM04D003656 ORTHO04D004526 2.1e-86 322.8 239 69.0
HBR1847G009 Hevea brasiliensis HOM04D003656 ORTHO04D004526 2.7e-86 322.4 250 65.6
TPR.G6250 Trifolium pratense HOM04D003656 ORTHO04D004526 2.7e-86 322.4 231 70.1
Achn054781 Actinidia chinensis HOM04D003656 ORTHO04D004526 2.1e-83 312.8 245 66.1
Glyma.11G239700 Glycine max HOM04D003656 ORTHO04D004526 2.8e-83 312.4 245 66.1
Manes.13G075300 Manihot esculenta HOM04D003656 ORTHO04D004526 2.8e-83 312.4 244 64.8
AH005997 Amaranthus hypochondriacus HOM04D003656 ORTHO04D004526 3.6e-83 312.0 247 64.8
Glyma.18G017700 Glycine max HOM04D003656 ORTHO04D004526 8.1e-83 310.8 245 65.3
DCAR_011511 Daucus carota HOM04D003656 ORTHO04D004526 8.9e-82 307.4 244 65.6
Peaxi162Scf00805g00021 Petunia axillaris HOM04D003656 ORTHO04D004526 1.5e-81 306.6 247 65.6
PGSC0003DMG400001895 Solanum tuberosum HOM04D003656 ORTHO04D004526 8.4e-80 300.8 244 63.5
Solyc03g078640.1 Solanum lycopersicum HOM04D003656 ORTHO04D004526 2.1e-78 296.2 251 61.4
C.cajan_19433.g Cajanus cajan HOM04D003656 ORTHO04D004526 3.5e-78 295.4 241 66.0
Migut.L00115 Erythranthe guttata HOM04D003656 ORTHO04D004526 1.3e-77 293.5 249 61.0
PGSC0003DMG400023187 Solanum tuberosum HOM04D003656 ORTHO04D004526 3.9e-77 292.0 249 60.6
CAN.G480.1 Capsicum annuum HOM04D003656 ORTHO04D004526 3.3e-76 288.9 250 61.6
Solyc04g055090.1 Solanum lycopersicum HOM04D003656 ORTHO04D004526 1.6e-75 286.6 244 61.1
HBR2899G002 Hevea brasiliensis HOM04D003656 ORTHO04D004526 4.9e-72 275.0 244 58.6
UGI.Scf00453.16099 Utricularia gibba HOM04D003656 ORTHO04D004526 7.1e-71 271.2 251 57.0
DCAR_001485 Daucus carota HOM04D003656 ORTHO04D004526 1.1e-68 263.8 247 60.3
Glyma.05G179100 Glycine max HOM04D003656 ORTHO04D004526 2.5e-68 262.7 231 60.2
UGI.Scf00002.374 Utricularia gibba HOM04D003656 ORTHO04D004526 3.0e-61 239.2 224 52.2
Vradi07g18930 Vigna radiata var. radiata HOM04D003656 ORTHO04D004526 1.4e-47 193.7 176 61.4
LOC_Os09g20540 Oryza sativa ssp. japonica HOM04D003656 ORTHO04D004526 3.3e-44 182.6 262 39.3
PAB00023325 Picea abies HOM04D003656 ORTHO04D004526 1.6e-43 180.3 245 39.2
Zm00001d027348 Zea mays HOM04D003656 ORTHO04D004526 5.9e-41 171.8 248 41.1
TPR.G17843 Trifolium pratense HOM04D003656 ORTHO04D004526 4.2e-39 165.6 89 86.5
ATR0564G070 Amborella trichopoda HOM04D003656 ORTHO04D004526 3.6e-38 162.5 241 39.0
Mapoly0036s0106 Marchantia polymorpha HOM04D003656 ORTHO04D004526 1.8e-37 160.2 244 38.9
LOC_Os08g31760 Oryza sativa ssp. japonica HOM04D003656 ORTHO04D004526 1.5e-36 157.1 241 38.6
PAB00060229 Picea abies HOM04D003656 ORTHO04D004526 1.1e-34 151.0 217 38.2
SMO012G0039 Selaginella moellendorffii HOM04D003656 ORTHO04D004526 9.1e-34 147.9 247 37.2
Pbr031134.1.g Pyrus bretschneideri HOM04D003656 ORTHO04D004526 5.9e-33 145.2 260 38.1
Pp3c24_14210 Physcomitrium patens HOM04D003656 ORTHO04D004526 3.5e-25 119.4 243 30.9
Pp3c8_17900 Physcomitrium patens HOM04D003656 ORTHO04D004526 3.5e-25 119.4 218 30.7
Zm00001d009386 Zea mays HOM04D003656 ORTHO04D004526 1.4e-23 114.0 249 32.9
Zm00001d036375 Zea mays HOM04D003656 ORTHO04D004526 1.2e-22 110.9 189 38.6
Zm00001d048999 Zea mays HOM04D003656 ORTHO04D004526 5.3e-18 95.5 242 31.8
Zm00001d030001 Zea mays HOM04D003656 ORTHO04D004526 7.0e-18 95.1 208 30.8
Zm00001d036378 Zea mays HOM04D003656 ORTHO04D004526 4.5e-17 92.4 182 34.6
Cla014150.g Citrullus lanatus HOM04D003656 ORTHO04D004526 1.5e-15 87.4 82 59.8
Zm00001d051648 Zea mays HOM04D003656 ORTHO04D004526 1.4e-13 80.9 161 35.4
Zm00001d030847 Zea mays HOM04D003656 ORTHO04D004526 1.3e-11 74.3 141 39.0
Zm00001d003849 Zea mays HOM04D003656 ORTHO04D004526 2.4e-10 70.1 149 34.2
PAB00054986 Picea abies HOM04D003656 ORTHO04D004526 4.5e-09 65.9 100 34.0
Zm00001d038951 Zea mays HOM04D003656 ORTHO04D004526 7.7e-09 65.1 215 29.3
UGI.Scf00060.5802 Utricularia gibba HOM04D003656 ORTHO04D004526 1.3e-08 64.3 44 59.1
Zm00001d028206 Zea mays HOM04D003656 ORTHO04D004526 1.1e-07 61.2 208 25.0
Zm00001d014411 Zea mays HOM04D003656 ORTHO04D004526 4.2e-07 59.3 196 26.5
Zm00001d012864 Zea mays HOM04D003656 ORTHO04D004526 4.7e-06 55.8 177 30.5

Actinidia chinensis (1 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (0 genes)
Beta vulgaris (0 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Cajanus cajan (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Carica papaya (1 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (0 genes)
Daucus carota (3 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (4 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (2 genes)
Malus domestica (0 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Oryza sativa ssp. japonica (2 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (2 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (4 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (2 genes)
Solanum tuberosum (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Utricularia gibba (3 genes)
Vigna radiata var. radiata (2 genes)
Vitis vinifera (0 genes)
Zea mays (13 genes)
Ziziphus jujuba (1 genes)

Program Settings