Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G45150	Arabidopsis thaliana	0.0	1966	958	100.00
AT3G20420	Arabidopsis thaliana	9e-79	268	389	43.44
ATR_00007G02840	Amborella trichopoda	6e-42	166	527	27.51
ATR_00007G02860	Amborella trichopoda	1e-37	150	241	37.34
OS05G18850	Oryza sativa	2e-36	145	253	37.15
OS10G34430	Oryza sativa	7e-31	135	415	28.67
AT3G43920	Arabidopsis thaliana	1e-29	132	414	28.99
OS01G68120	Oryza sativa	3e-29	130	193	37.82
AT1G01040	Arabidopsis thaliana	1e-28	128	174	39.08
PP00030G01470	Physcomitrella patens	4e-27	123	175	37.71
AC00G50450	Asterochloris sp. Cgr-DA1pho v2.0	5e-27	114	177	35.59
OS03G02970	Oryza sativa	6e-27	123	175	38.29
PP00149G00220	Physcomitrella patens	7e-27	122	174	39.08
OS06G25250	Oryza sativa	7e-27	117	189	34.92
PP00082G00590	Physcomitrella patens	3e-26	120	178	36.52
AT4G15417	Arabidopsis thaliana	5e-26	114	172	38.95
ATR_00018G00030	Amborella trichopoda	1e-25	119	175	37.14
ATR_00026G00150	Amborella trichopoda	1e-23	112	172	34.30
ATR_00033G00650	Amborella trichopoda	3e-22	108	191	34.03
PP00196G00310	Physcomitrella patens	1e-21	103	183	29.51
AT3G03300	Arabidopsis thaliana	9e-21	102	176	33.52
OS03G38740	Oryza sativa	2e-20	101	172	33.72
AT5G20320	Arabidopsis thaliana	3e-19	98.2	176	30.11
OS09G14610	Oryza sativa	7e-19	95.9	171	33.33
ATR_00016G03530	Amborella trichopoda	8e-19	96.7	177	29.94
ATR_00007G02850	Amborella trichopoda	2e-18	89.4	154	32.47
OS04G43050	Oryza sativa	9e-18	93.2	393	24.17
ccr166220	Chondrus crispus	2e-17	92.0	170	32.35
ENSMUSG00000041415	Mus musculus	4e-14	81.6	179	26.26
ENSG00000100697	Homo sapiens	6e-14	80.9	179	26.26
FBgn0039016	Drosophila melanogaster	7e-14	80.5	177	27.12
OS01G37050	Oryza sativa	8e-14	76.6	206	30.58
ccr82040	Chondrus crispus	1e-12	76.3	159	28.93
ATR_00014G00050	Amborella trichopoda	6e-12	69.3	89	41.57
SPCC188.13c	Schizosaccharomyces pombe	2e-11	72.4	154	27.27
FBgn0034246	Drosophila melanogaster	2e-11	72.4	209	28.71
AP00G48790	Auxenochlorella protothecoides	8e-11	70.5	130	26.92
WBGene00000939	Caenorhabditis elegans	1e-08	63.2	174	21.84
Naga_100010g67	Nannochloropsis gaditana	2e-08	62.8	174	31.03
pte363500	Paramecium tetraurelia	2e-06	56.2	183	24.59

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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