Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G08450	Arabidopsis thaliana	0.0	874	425	100.00
OS05G43170	Oryza sativa	0.0	585	365	78.90
OS01G67054	Oryza sativa	0.0	562	416	71.88
ATR_00066G02350	Amborella trichopoda	5e-177	504	304	78.29
PP00065G00510	Physcomitrella patens	5e-167	482	354	62.43
PP00034G00200	Physcomitrella patens	8e-166	480	397	59.45
AT1G09210	Arabidopsis thaliana	8e-153	447	355	60.28
AT1G56340	Arabidopsis thaliana	2e-152	446	355	59.44
ATR_00003G00100	Amborella trichopoda	1e-148	435	348	60.06
OS07G14270	Oryza sativa	2e-147	433	341	61.00
OS03G61670	Oryza sativa	2e-145	429	358	57.54
CR01G08330	Chlamydomonas reinhardtii	2e-131	392	342	55.56
VC00G16410	Volvox carteri	8e-130	388	358	52.79
DDB_G0283539	Dictyostelium discoideum	4e-128	384	374	49.20
CV00G61500	Coccomyxa subellipsoidea C-169	2e-113	346	361	49.58
ENSMUSG00000003814	Mus musculus	1e-112	344	341	51.03
ENSG00000179218	Homo sapiens	2e-111	340	352	49.43
Naga_100016g48	Nannochloropsis gaditana	1e-109	337	389	45.50
MP09G04800	Micromonas pusilla strain CCMP1545	2e-109	335	365	47.12
FBgn0005585	Drosophila melanogaster	1e-106	328	412	44.42
MRCC299_16G00480	Micromonas sp RCC299	4e-106	328	353	47.59
WBGene00000802	Caenorhabditis elegans	2e-104	322	340	48.53
TP06G06480	Thalassiosira pseudonana	4e-103	318	374	46.79
FC009G04150	Fragilariopsis cylindrus	5e-100	311	381	46.46
PTI_28G00590	Phaeodactylum tricornutum	3e-98	306	356	46.35
ES0363G00070	Ectocarpus siliculosus	1e-86	277	369	44.72
phs30330	Phytophtora sojae	3e-77	253	341	43.99
BPRRCC1105_02G02750	Bathycoccus prasinos	4e-77	253	383	40.99
AA0003G04790	Aureococcus anophagefferens	1e-74	244	331	43.50
ENSMUSG00000019732	Mus musculus	2e-67	226	396	35.86
gsu98850	Galdieria sulphuraria	3e-63	219	420	36.67
OS03G59264	Oryza sativa	5e-63	225	189	56.08
emh102770	Emiliania huxleyi	2e-59	205	367	38.15
ENSG00000127022	Homo sapiens	2e-59	209	395	35.95
emh664170	Emiliania huxleyi	2e-59	205	367	38.15
ENSMUSG00000020368	Mus musculus	6e-59	208	395	35.70
AT5G61790	Arabidopsis thaliana	1e-57	203	397	34.26
OM_09G03720	Ostreococcus mediterraneus	4e-54	194	416	33.41
ENSMUSG00000002190	Mus musculus	7e-54	194	386	32.90
AC00G18940	Asterochloris sp. Cgr-DA1pho v2.0	9e-53	190	404	35.40
FBgn0015622	Drosophila melanogaster	2e-52	190	384	34.38
CNC64A_018G00120	Chlorella sp NC64A	1e-51	187	399	34.09
ENSG00000153132	Homo sapiens	2e-51	188	410	32.20
CNC64A_018G00110	Chlorella sp NC64A	3e-51	184	398	34.92
PP00025G01350	Physcomitrella patens	3e-50	184	386	35.49
FBgn0264077	Drosophila melanogaster	3e-50	185	398	33.17
PP00158G00090	Physcomitrella patens	3e-50	183	401	32.67
PP00158G00100	Physcomitrella patens	3e-50	183	401	32.67
AP00G01000	Auxenochlorella protothecoides	8e-50	182	380	34.21
CV00G60800	Coccomyxa subellipsoidea C-169	9e-50	180	408	31.13
OS04G32950	Oryza sativa	1e-49	182	382	35.08
ccr138600	Chondrus crispus	1e-49	182	441	31.52
OL03G03470	Ostreococcus lucimarinus	1e-49	178	361	33.52
emh617060	Emiliania huxleyi	2e-49	181	386	31.61
emh278980	Emiliania huxleyi	2e-49	181	386	31.61
ORCC809_06G04620	Ostreococcus sp RCC809	4e-49	177	372	32.26
VC00G35300	Volvox carteri	5e-49	181	425	33.18
PP00079G00490	Physcomitrella patens	5e-48	175	394	32.49
RCC4223.05g03560	Picochlorum_RCC4223	1e-47	176	406	31.28
PI00G06040	Picochlorum sp. SENEW3 (SE3)	2e-47	176	433	31.64
OT_03G03500	Ostreococcus tauri	2e-47	176	380	32.11
AT5G07340	Arabidopsis thaliana	8e-47	174	412	34.71
WBGene00000567	Caenorhabditis elegans	8e-47	175	350	33.14
emh474110	Emiliania huxleyi	4e-46	171	356	34.83
FBgn0030377	Drosophila melanogaster	6e-46	172	300	36.00
ATR_00016G02750	Amborella trichopoda	9e-44	165	372	33.87
HE0000G44430	Helicosporidium sp.	2e-43	162	351	31.91
MRCC299_02G01020	Micromonas sp RCC299	1e-42	159	331	33.53
CM09G02130	Cyanidioschyzon merolae	2e-42	162	408	30.39
ES0130G00140	Ectocarpus siliculosus	4e-41	158	405	30.86
SPAC3C7.11c	Schizosaccharomyces pombe	5e-41	157	435	28.51
DDB_G0271144	Dictyostelium discoideum	6e-41	157	378	29.10
CR07G10700	Chlamydomonas reinhardtii	8e-41	157	410	30.49
phs39110	Phytophtora sojae	3e-40	155	397	29.22
AA0004G01140	Aureococcus anophagefferens	7e-40	150	295	34.92
MP01G09680	Micromonas pusilla strain CCMP1545	2e-36	145	375	30.67
BPRRCC1105_09G03680	Bathycoccus prasinos	2e-35	141	323	30.96
YAL058W	Saccharomyces cerevisiae strain S288C	3e-34	137	473	28.75
emh35090	Emiliania huxleyi	4e-25	106	192	34.38
emh77250	Emiliania huxleyi	7e-13	68.9	77	44.16
OS08G44670	Oryza sativa	7e-08	55.5	59	45.76
ATR_00003G00090	Amborella trichopoda	4e-06	50.1	59	42.37

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment