Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13710 Brassica napus
A03p53480 Brassica napus
A06p15880 Brassica napus
Aa31LG6G4450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5496 Anthoceros agrestis
Actinidia11885 Actinidia chinensis
Actinidia39270 Actinidia chinensis
Ah.14g087640 Amaranthus hybridus
AL7G31260 Arabidopsis lyrata
Aqoxy3G02484 Aquilegia oxysepala
Aqoxy5G01269 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7FS7F8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1Q4DS Arachis hypogaea
AT4G22285 Arabidopsis thaliana
AT4G22350 Arabidopsis thaliana
AT4G22410 Arabidopsis thaliana
ATR0712G044 Amborella trichopoda
Atru.chr1.2449 Acer truncatum
Atru.chr1.2450 Acer truncatum
Atru.chr1.2452 Acer truncatum
AUR62003618 Chenopodium quinoa
AUR62012795 Chenopodium quinoa
AUR62014154 Chenopodium quinoa
AUR62017961 Chenopodium quinoa
AUR62021859 Chenopodium quinoa
AUR62030419 Chenopodium quinoa
BcaNung01693 Brassica carinata
BcaNung02500 Brassica carinata
BolC1t01609H Brassica oleracea
BolC3t20198H Brassica oleracea
BolC7t45683H Brassica oleracea
BraA01t01316Z Brassica rapa
BraA03t14414Z Brassica rapa
BraA06t24699Z Brassica rapa
C01p16620 Brassica napus
C07p51810 Brassica napus
CAN.G1299.7 Capsicum annuum
CAN.G99.12 Capsicum annuum
CANSAT56G3158 Cannabis sativa
CARHR229260 Cardamine hirsuta
Carub.0007s1895 Capsella rubella
Ca_00446_v3 Cicer arietinum L.
CBR_g53671 Chara braunii
Cc09_g00870 Coffea canephora
CDE04G0225 Ceratophyllum demersum
CDE04G2792 Ceratophyllum demersum
CDE07G0952 Ceratophyllum demersum
CDE07G1892 Ceratophyllum demersum
Cfa027151 Carpinus fangiana
Ciclev10004667m.g Citrus clementina
CiPaw.09G102300 Carya illinoinensis
CiPaw.10G077900 Carya illinoinensis
ClCG01G010210 Citrullus lanatus
ClCG01G010230 Citrullus lanatus
COL.COLO4_04224 Corchorus olitorius
COL.COLO4_07903 Corchorus olitorius
COL.COLO4_14642 Corchorus olitorius
COL.COLO4_19462 Corchorus olitorius
COL.COLO4_31885 Corchorus olitorius
COL.COLO4_37856 Corchorus olitorius
Cpa.g.c38821 Carica papaya
Cpa.g.sc109.39 Carica papaya
Cpa.g.sc109.41 Carica papaya
Cre17.g721517 Chlamydomonas reinhardtii
Cre17.g721600 Chlamydomonas reinhardtii
CsaV3_1G017170 Cucumis sativus L.
CSS0023179 Camellia sinensis var. sinensis
CSS0046639 Camellia sinensis var. sinensis
DCAR_008620 Daucus carota
Dinv07402 Davidia involucrata
Dinv07403 Davidia involucrata
Duzib192G0171 Durio zibethinus
Duzib235G0001 Durio zibethinus
Duzib264G0116 Durio zibethinus
ECA233G4304 Erigeron canadensis
EL10Ac8g20189 Beta vulgaris
Eucgr.H03283 Eucalyptus grandis
FAN02G3088 Fragaria x ananassa
FAN05G3144 Fragaria x ananassa
FAN05G4407 Fragaria x ananassa
FAN09G3292 Fragaria x ananassa
FAN14G5460 Fragaria x ananassa
FAN21G2909 Fragaria x ananassa
FAN25G1165 Fragaria x ananassa
FvH4_3g00980 Fragaria vesca
FvH4_6g03150 Fragaria vesca
Glyma.10G073300 Glycine max
Glyma.13G154200 Glycine max
Gohir.A06G153180 Gossypium hirsutum
Gohir.A06G205300 Gossypium hirsutum
Gohir.D06G159900 Gossypium hirsutum
Gohir.D06G216200 Gossypium hirsutum
Gorai.010G186600 Gossypium raimondii
Gorai.010G250000 Gossypium raimondii
GSVIVG01037100001 Vitis vinifera
HanXRQChr03g0086431 Helianthus annuus
HanXRQChr03g0086471 Helianthus annuus
HanXRQChr03g0086481 Helianthus annuus
HanXRQChr03g0086521 Helianthus annuus
HanXRQChr05g0129131 Helianthus annuus
Haze_06920 Corylus avellana
Haze_06925 Corylus avellana
Haze_26297 Corylus avellana
Hma1.2p1_0657F.1_g197170 Hydrangea macrophylla
Hma1.2p1_2009F.1_g310970 Hydrangea macrophylla
HPP92_017772 Vanilla planifolia
Hund23407 Selenicereus undatus
Lalb_Chr03g0038011 Lupinus albus
Lj2A261T37 Lonicera japonica
Lj2C282T7 Lonicera japonica
Lj2g0013565 Lotus japonicus
Lj6g0008289 Lotus japonicus
Lj6P617T46 Lonicera japonica
Lsat_1_v5_gn_7_13661 Lactuca sativa
Manes.01G126900 Manihot esculenta
Manes.02G083800 Manihot esculenta
Mapoly0061s0070 Marchantia polymorpha
MCO11G519 Micromonas commoda
MD05G1357700 Malus domestica
MD10G1331700 Malus domestica
Medtr4g077320 Medicago truncatula
Medtr4g077490 Medicago truncatula
MELO3C025562.2 Cucumis melo
Migut.M01395 Erythranthe guttata
MSTRG.16027 Avicennia marina
Nitab4.5_0000443g0170 Nicotiana tabacum
Nitab4.5_0001735g0140 Nicotiana tabacum
Nitab4.5_0008965g0020 Nicotiana tabacum
Nn1g07382 Nelumbo nucifera
Oeu015944.1 Olea europaea
Oeu051248.1 Olea europaea
Os09g0407900 Oryza sativa ssp. japonica
Peaxi162Scf00177g00115 Petunia axillaris
Peaxi162Scf00199g00923 Petunia axillaris
Peaxi162Scf00610g00120 Petunia axillaris
PGR042G2289 Punica granatum
PGR102G0671 Punica granatum
PGSC0003DMG400009435 Solanum tuberosum
Phvul.007G152400 Phaseolus vulgaris
Phvul.008G270100 Phaseolus vulgaris
Potri.006G010100 Populus trichocarpa
Potri.016G014000 Populus trichocarpa
Pp3c2_2850 Physcomitrium patens
PRCOL_00000942 Prasinoderma coloniale
Prupe.4G010400 Prunus persica
Psat7g171280 Pisum sativum
PSO541G5704 Papaver somniferum
PSO675G6471 Papaver somniferum
QL05p069714 Quercus lobata
QL10p037768 Quercus lobata
QL10p037775 Quercus lobata
RcHm_v2.0_Chr4g0397451 Rosa chinensis
RcHm_v2.0_Chr4g0397461 Rosa chinensis
RcHm_v2.0_Chr5g0001501 Rosa chinensis
RcHm_v2.0_Chr5g0001511 Rosa chinensis
Rhsim02G0099100 Rhododendron simsii
Sabra06G0008300 Salix brachista
Sabra16G0001800 Salix brachista
Sabra16G0016300 Salix brachista
Sc17g0007740 Simmondsia chinensis
Sed0023864 Sechium edule
SEGI_20748 Sequoiadendron giganteum
SEGI_26834 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01876 Striga asiatica
SHI24460 Sapria himalayana
SMO118G0007 Selaginella moellendorffii
Solyc02g068480.3 Solanum lycopersicum
Sopen02g017620 Solanum pennellii
Sp7g20480 Schrenkiella parvula
TAR626G0254 Trochodendron aralioides
THA.LOC104812993 Tarenaya hassleriana
Thecc.06G233400 Theobroma cacao
Thhalv10024723m.g Eutrema salsugineum
TPR.G23689 Trifolium pratense
TPR.G29505 Trifolium pratense
TPR.G33399 Trifolium pratense
TPR.G34398 Trifolium pratense
unitig_62.g23505 Utricularia gibba
vmacro15759 Vaccinium macrocarpon
VMungo0647G1639 Vigna mungo
Zm00001eb225610 Zea mays

User provided reference genes

Program Settings