Gene: ATR0712G044

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0712G044
  • Transcript Identifier ATR0712G044.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00055 : 3477365-3496092 : positive

Gene Family Information

  • ID HOM05D003820
  • #Genes/#Species 181/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00055.130.v1.0
  • pacid 31571652

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016579
IEA
InterProprotein deubiquitination
GO:0000245
IEA
InterProspliceosomal complex assembly
GO:0006397
IEA
InterPromRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0008270
IEA
InterProzinc ion binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038765 Papain-like cysteine peptidase superfamily
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR033809 USP39
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001607 Zinc finger, UBP-type
Mapman id Description
16.2.1.5.4 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (USP39)