Gene: HanXRQChr03g0086521

General Information

Structural Information

Species Helianthus annuus
Gene Identifier HanXRQChr03g0086521
Transcript Identifier HanXRQChr03g0086521.r1.2.494
Gene Type Coding gene
Location HanXRQChr03 : 146616324-146617605 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003820
#Genes/#Species 181/97
Phylogenetic origin

ID ORTHO05D004540
#Genes/#Species 177/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id HanXRQChr03g0086521.r1.2
pacid 40332668

Descriptions

Short descriptions
Ortholog descriptions

Description Putative zinc finger, UBP-type; Zinc finger, RING/FYVE/PHD-type; Ubiquitin specific protease domain

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016579	IEA	InterPro	protein deubiquitination
GO:0000245	IEA	InterPro	spliceosomal complex assembly
GO:0006397	IEA	InterPro	mRNA processing

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0004843	IEA	InterPro	thiol-dependent deubiquitinase

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001607	Zinc finger, UBP-type
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR033809	USP39
IPR038765	Papain-like cysteine peptidase superfamily
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
16.2.1.5.4	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (USP39)